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Origins and Evolution of Seasonal Human Coronaviruses.
Otieno JR, Cherry JL, Spiro DJ, Nelson MI, Trovão NS. Otieno JR, et al. Among authors: spiro dj. Viruses. 2022 Jul 15;14(7):1551. doi: 10.3390/v14071551. Viruses. 2022. PMID: 35891531 Free PMC article.
Epidemiology and genetic diversity of SARS-CoV-2 lineages circulating in Africa.
Okoh OS, Nii-Trebi NI, Jakkari A, Olaniran TT, Senbadejo TY, Kafintu-Kwashie AA, Dairo EO, Ganiyu TO, Akaninyene IE, Ezediuno LO, Adeosun IJ, Ockiya MA, Jimah EM, Spiro DJ, Oladipo EK, Trovão NS. Okoh OS, et al. Among authors: spiro dj. iScience. 2022 Mar 18;25(3):103880. doi: 10.1016/j.isci.2022.103880. Epub 2022 Feb 5. iScience. 2022. PMID: 35156006 Free PMC article.
Evolutionary history and introduction of SARS-CoV-2 Alpha VOC/B.1.1.7 in Pakistan through international travelers.
Nasir A, Bukhari AR, Trovão NS, Thielen PM, Kanji A, Mahmood SF, Ghanchi NK, Ansar Z, Merritt B, Mehoke T, Razzak SA, Syed MA, Shaikh SR, Wassan M, Aamir UB, Baele G, Rasmussen Z, Spiro D, Hasan R, Hasan Z. Nasir A, et al. Virus Evol. 2022 Mar 17;8(1):veac020. doi: 10.1093/ve/veac020. eCollection 2022. Virus Evol. 2022. PMID: 35462736 Free PMC article.
The early diversification of influenza A/H1N1pdm.
Nelson M, Spiro D, Wentworth D, Beck E, Fan J, Ghedin E, Halpin R, Bera J, Hine E, Proudfoot K, Stockwell T, Lin X, Griesemer S, Kumar S, Bose M, Viboud C, Holmes E, Henrickson K. Nelson M, et al. PLoS Curr. 2009 Nov 3;1:RRN1126. doi: 10.1371/currents.rrn1126. PLoS Curr. 2009. PMID: 20029664 Free PMC article.
Stochastic processes are key determinants of short-term evolution in influenza a virus.
Nelson MI, Simonsen L, Viboud C, Miller MA, Taylor J, George KS, Griesemer SB, Ghedin E, Sengamalay NA, Spiro DJ, Volkov I, Grenfell BT, Lipman DJ, Taubenberger JK, Holmes EC. Nelson MI, et al. Among authors: spiro dj. PLoS Pathog. 2006 Dec;2(12):e125. doi: 10.1371/journal.ppat.0020125. PLoS Pathog. 2006. PMID: 17140286 Free PMC article.
Improving influenza vaccine virus selection: report of a WHO informal consultation held at WHO headquarters, Geneva, Switzerland, 14-16 June 2010.
WHO Writing Group; Ampofo WK, Baylor N, Cobey S, Cox NJ, Daves S, Edwards S, Ferguson N, Grohmann G, Hay A, Katz J, Kullabutr K, Lambert L, Levandowski R, Mishra AC, Monto A, Siqueira M, Tashiro M, Waddell AL, Wairagkar N, Wood J, Zambon M, Zhang W. WHO Writing Group, et al. Influenza Other Respir Viruses. 2012 Mar;6(2):142-52, e1-5. doi: 10.1111/j.1750-2659.2011.00277.x. Epub 2011 Aug 8. Influenza Other Respir Viruses. 2012. PMID: 21819547 Free PMC article.
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