Spencer F - Search Results

1

Performance assessment of copy number microarray platforms using a spike-in experiment.

Halper-Stromberg E, Frelin L, Ruczinski I, Scharpf R, Jie C, Carvalho B, Hao H, Hetrick K, Jedlicka A, Dziedzic A, Doheny K, Scott AF, Baylin S, Pevsner J, Spencer F, Irizarry RA. Halper-Stromberg E, et al. Among authors: spencer f. Bioinformatics. 2011 Apr 15;27(8):1052-60. doi: 10.1093/bioinformatics/btr106. Bioinformatics. 2011. PMID: 21478196 Free PMC article.

2

Multiple-laboratory comparison of microarray platforms.

Irizarry RA, Warren D, Spencer F, Kim IF, Biswal S, Frank BC, Gabrielson E, Garcia JG, Geoghegan J, Germino G, Griffin C, Hilmer SC, Hoffman E, Jedlicka AE, Kawasaki E, Martínez-Murillo F, Morsberger L, Lee H, Petersen D, Quackenbush J, Scott A, Wilson M, Yang Y, Ye SQ, Yu W. Irizarry RA, et al. Among authors: spencer f. Nat Methods. 2005 May;2(5):345-50. doi: 10.1038/nmeth756. Epub 2005 Apr 21. Nat Methods. 2005. PMID: 15846361 Free article.

3

Improved microarray methods for profiling the Yeast Knockout strain collection.

Yuan DS, Pan X, Ooi SL, Peyser BD, Spencer FA, Irizarry RA, Boeke JD. Yuan DS, et al. Nucleic Acids Res. 2005 Jul 1;33(12):e103. doi: 10.1093/nar/gni105. Nucleic Acids Res. 2005. PMID: 15994458 Free PMC article.

4

Improved statistical analysis of budding yeast TAG microarrays revealed by defined spike-in pools.

Peyser BD, Irizarry RA, Tiffany CW, Chen O, Yuan DS, Boeke JD, Spencer FA. Peyser BD, et al. Nucleic Acids Res. 2005 Sep 15;33(16):e140. doi: 10.1093/nar/gni138. Nucleic Acids Res. 2005. PMID: 16166654 Free PMC article.

5

S-phase checkpoint genes safeguard high-fidelity sister chromatid cohesion.

Warren CD, Eckley DM, Lee MS, Hanna JS, Hughes A, Peyser B, Jie C, Irizarry R, Spencer FA. Warren CD, et al. Mol Biol Cell. 2004 Apr;15(4):1724-35. doi: 10.1091/mbc.e03-09-0637. Epub 2004 Jan 23. Mol Biol Cell. 2004. PMID: 14742710 Free PMC article.

6

Global synthetic-lethality analysis and yeast functional profiling.

Ooi SL, Pan X, Peyser BD, Ye P, Meluh PB, Yuan DS, Irizarry RA, Bader JS, Spencer FA, Boeke JD. Ooi SL, et al. Trends Genet. 2006 Jan;22(1):56-63. doi: 10.1016/j.tig.2005.11.003. Epub 2005 Nov 23. Trends Genet. 2006. PMID: 16309778 Review.

7

Analysis of genetic interactions on a genome-wide scale in budding yeast: diploid-based synthetic lethality analysis by microarray.

Meluh PB, Pan X, Yuan DS, Tiffany C, Chen O, Sookhai-Mahadeo S, Wang X, Peyser BD, Irizarry R, Spencer FA, Boeke JD. Meluh PB, et al. Methods Mol Biol. 2008;416:221-47. doi: 10.1007/978-1-59745-321-9_15. Methods Mol Biol. 2008. PMID: 18392971

8

Statistical analysis of fitness data determined by TAG hybridization on microarrays.

Peyser BD, Irizarry R, Spencer FA. Peyser BD, et al. Methods Mol Biol. 2008;416:369-81. doi: 10.1007/978-1-59745-321-9_25. Methods Mol Biol. 2008. PMID: 18392981

9

Identification of essential components of the S. cerevisiae kinetochore.

Doheny KF, Sorger PK, Hyman AA, Tugendreich S, Spencer F, Hieter P. Doheny KF, et al. Among authors: spencer f. Cell. 1993 May 21;73(4):761-74. doi: 10.1016/0092-8674(93)90255-o. Cell. 1993. PMID: 8500169 Free PMC article.

10

Commensurate distances and similar motifs in genetic congruence and protein interaction networks in yeast.

Ye P, Peyser BD, Spencer FA, Bader JS. Ye P, et al. BMC Bioinformatics. 2005 Nov 9;6:270. doi: 10.1186/1471-2105-6-270. BMC Bioinformatics. 2005. PMID: 16283923 Free PMC article.

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