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OME-Zarr: a cloud-optimized bioimaging file format with international community support.
Histochem Cell Biol. 2023 Sep;160(3):223-251. doi: 10.1007/s00418-023-02209-1. Epub 2023 Jul 10.
Histochem Cell Biol. 2023.
PMID: 37428210
Free PMC article.
OME-Zarr: a cloud-optimized bioimaging file format with international community support.
Moore J, Basurto-Lozada D, Besson S, Bogovic J, Bragantini J, Brown EM, Burel JM, Moreno XC, de Medeiros G, Diel EE, Gault D, Ghosh SS, Gold I, Halchenko YO, Hartley M, Horsfall D, Keller MS, Kittisopikul M, Kovacs G, Yoldaş AK, Kyoda K, de la Villegeorges ALT, Li T, Liberali P, Lindner D, Linkert M, Lüthi J, Maitin-Shepard J, Manz T, Marconato L, McCormick M, Lange M, Mohamed K, Moore W, Norlin N, Ouyang W, Özdemir B, Palla G, Pape C, Pelkmans L, Pietzsch T, Preibisch S, Prete M, Rzepka N, Samee S, Schaub N, Sidky H, Solak AC, Stirling DR, Striebel J, Tischer C, Toloudis D, Virshup I, Walczysko P, Watson AM, Weisbart E, Wong F, Yamauchi KA, Bayraktar O, Cimini BA, Gehlenborg N, Haniffa M, Hotaling N, Onami S, Royer LA, Saalfeld S, Stegle O, Theis FJ, Swedlow JR.
Moore J, et al. Among authors: solak ac.
bioRxiv [Preprint]. 2023 May 7:2023.02.17.528834. doi: 10.1101/2023.02.17.528834.
bioRxiv. 2023.
PMID: 36865282
Free PMC article.
Updated.
Preprint.
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DaXi-high-resolution, large imaging volume and multi-view single-objective light-sheet microscopy.
Yang B, Lange M, Millett-Sikking A, Zhao X, Bragantini J, VijayKumar S, Kamb M, Gómez-Sjöberg R, Solak AC, Wang W, Kobayashi H, McCarroll MN, Whitehead LW, Fiolka RP, Kornberg TB, York AG, Royer LA.
Yang B, et al. Among authors: solak ac.
Nat Methods. 2022 Apr;19(4):461-469. doi: 10.1038/s41592-022-01417-2. Epub 2022 Mar 21.
Nat Methods. 2022.
PMID: 35314838
Free PMC article.
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Democratising deep learning for microscopy with ZeroCostDL4Mic.
von Chamier L, Laine RF, Jukkala J, Spahn C, Krentzel D, Nehme E, Lerche M, Hernández-Pérez S, Mattila PK, Karinou E, Holden S, Solak AC, Krull A, Buchholz TO, Jones ML, Royer LA, Leterrier C, Shechtman Y, Jug F, Heilemann M, Jacquemet G, Henriques R.
von Chamier L, et al. Among authors: solak ac.
Nat Commun. 2021 Apr 15;12(1):2276. doi: 10.1038/s41467-021-22518-0.
Nat Commun. 2021.
PMID: 33859193
Free PMC article.
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