Smith MA - Search Results

1

Repeat RNAs associate with replication forks and post-replicative DNA.

Gylling HM, Gonzalez-Aguilera C, Smith MA, Kaczorowski DC, Groth A, Lund AH. Gylling HM, et al. Among authors: smith ma. RNA. 2020 Sep;26(9):1104-1117. doi: 10.1261/rna.074757.120. Epub 2020 May 11. RNA. 2020. PMID: 32393525 Free PMC article.

2

DNA methylation is required to maintain both DNA replication timing precision and 3D genome organization integrity.

Du Q, Smith GC, Luu PL, Ferguson JM, Armstrong NJ, Caldon CE, Campbell EM, Nair SS, Zotenko E, Gould CM, Buckley M, Chia KM, Portman N, Lim E, Kaczorowski D, Chan CL, Barton K, Deveson IW, Smith MA, Powell JE, Skvortsova K, Stirzaker C, Achinger-Kawecka J, Clark SJ. Du Q, et al. Among authors: smith gc, smith ma. Cell Rep. 2021 Sep 21;36(12):109722. doi: 10.1016/j.celrep.2021.109722. Cell Rep. 2021. PMID: 34551299 Free article.

3

The RNA modification landscape in human disease.

Jonkhout N, Tran J, Smith MA, Schonrock N, Mattick JS, Novoa EM. Jonkhout N, et al. Among authors: smith ma. RNA. 2017 Dec;23(12):1754-1769. doi: 10.1261/rna.063503.117. Epub 2017 Aug 30. RNA. 2017. PMID: 28855326 Free PMC article. Review.

4

Targeted, High-Resolution RNA Sequencing of Non-coding Genomic Regions Associated With Neuropsychiatric Functions.

Hardwick SA, Bassett SD, Kaczorowski D, Blackburn J, Barton K, Bartonicek N, Carswell SL, Tilgner HU, Loy C, Halliday G, Mercer TR, Smith MA, Mattick JS. Hardwick SA, et al. Among authors: smith ma. Front Genet. 2019 Apr 12;10:309. doi: 10.3389/fgene.2019.00309. eCollection 2019. Front Genet. 2019. PMID: 31031799 Free PMC article.

5

SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer.

Askarian-Amiri ME, Crawford J, French JD, Smart CE, Smith MA, Clark MB, Ru K, Mercer TR, Thompson ER, Lakhani SR, Vargas AC, Campbell IG, Brown MA, Dinger ME, Mattick JS. Askarian-Amiri ME, et al. Among authors: smith ma. RNA. 2011 May;17(5):878-91. doi: 10.1261/rna.2528811. Epub 2011 Apr 1. RNA. 2011. PMID: 21460236 Free PMC article.

6

Structural and Functional Annotation of Long Noncoding RNAs.

Smith MA, Mattick JS. Smith MA, et al. Methods Mol Biol. 2017;1526:65-85. doi: 10.1007/978-1-4939-6613-4_4. Methods Mol Biol. 2017. PMID: 27896736

7

Molecular barcoding of native RNAs using nanopore sequencing and deep learning.

Smith MA, Ersavas T, Ferguson JM, Liu H, Lucas MC, Begik O, Bojarski L, Barton K, Novoa EM. Smith MA, et al. Genome Res. 2020 Sep;30(9):1345-1353. doi: 10.1101/gr.260836.120. Epub 2020 Sep 9. Genome Res. 2020. PMID: 32907883 Free PMC article.

8

Chiral DNA sequences as commutable controls for clinical genomics.

Deveson IW, Madala BS, Blackburn J, Barker C, Wong T, Barton KM, Smith MA, Watkins DN, Mercer TR. Deveson IW, et al. Among authors: smith ma. Nat Commun. 2019 Mar 22;10(1):1342. doi: 10.1038/s41467-019-09272-0. Nat Commun. 2019. PMID: 30902988 Free PMC article.

9

Featherweight long read alignment using partitioned reference indexes.

Gamaarachchi H, Parameswaran S, Smith MA. Gamaarachchi H, et al. Among authors: smith ma. Sci Rep. 2019 Mar 13;9(1):4318. doi: 10.1038/s41598-019-40739-8. Sci Rep. 2019. PMID: 30867495 Free PMC article.

10

Multiomic elucidation of a coding 99-mer repeat-expansion skeletal muscle disease.

Ruggieri A, Naumenko S, Smith MA, Iannibelli E, Blasevich F, Bragato C, Gibertini S, Barton K, Vorgerd M, Marcus K, Wang P, Maggi L, Mantegazza R, Dowling JJ, Kley RA, Mora M, Minassian BA. Ruggieri A, et al. Among authors: smith ma. Acta Neuropathol. 2020 Aug;140(2):231-235. doi: 10.1007/s00401-020-02164-4. Epub 2020 May 25. Acta Neuropathol. 2020. PMID: 32451610 Free PMC article. No abstract available.

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