Smillie C - Search Results

1

Smillie C, Garcillán-Barcia MP, Francia MV, Rocha EP, de la Cruz F. Smillie C, et al. Microbiol Mol Biol Rev. 2010 Sep;74(3):434-52. doi: 10.1128/MMBR.00020-10. Microbiol Mol Biol Rev. 2010. PMID: 20805406 Free PMC article. Review.

2

Unraveling the processes shaping mammalian gut microbiomes over evolutionary time.

Groussin M, Mazel F, Sanders JG, Smillie CS, Lavergne S, Thuiller W, Alm EJ. Groussin M, et al. Nat Commun. 2017 Feb 23;8:14319. doi: 10.1038/ncomms14319. Nat Commun. 2017. PMID: 28230052 Free PMC article.

3

Ecology drives a global network of gene exchange connecting the human microbiome.

Smillie CS, Smith MB, Friedman J, Cordero OX, David LA, Alm EJ. Smillie CS, et al. Nature. 2011 Oct 30;480(7376):241-4. doi: 10.1038/nature10571. Nature. 2011. PMID: 22037308

4

Two dynamic regimes in the human gut microbiome.

Gibbons SM, Kearney SM, Smillie CS, Alm EJ. Gibbons SM, et al. PLoS Comput Biol. 2017 Feb 21;13(2):e1005364. doi: 10.1371/journal.pcbi.1005364. eCollection 2017 Feb. PLoS Comput Biol. 2017. PMID: 28222117 Free PMC article.

5

Metagenomic mining of regulatory elements enables programmable species-selective gene expression.

Johns NI, Gomes ALC, Yim SS, Yang A, Blazejewski T, Smillie CS, Smith MB, Alm EJ, Kosuri S, Wang HH. Johns NI, et al. Among authors: smillie cs. Nat Methods. 2018 May;15(5):323-329. doi: 10.1038/nmeth.4633. Epub 2018 Mar 19. Nat Methods. 2018. PMID: 30052624 Free PMC article.

6

Strain Tracking Reveals the Determinants of Bacterial Engraftment in the Human Gut Following Fecal Microbiota Transplantation.

Smillie CS, Sauk J, Gevers D, Friedman J, Sung J, Youngster I, Hohmann EL, Staley C, Khoruts A, Sadowsky MJ, Allegretti JR, Smith MB, Xavier RJ, Alm EJ. Smillie CS, et al. Cell Host Microbe. 2018 Feb 14;23(2):229-240.e5. doi: 10.1016/j.chom.2018.01.003. Cell Host Microbe. 2018. PMID: 29447696 Free PMC article.

7

Mobile genes in the human microbiome are structured from global to individual scales.

Brito IL, Yilmaz S, Huang K, Xu L, Jupiter SD, Jenkins AP, Naisilisili W, Tamminen M, Smillie CS, Wortman JR, Birren BW, Xavier RJ, Blainey PC, Singh AK, Gevers D, Alm EJ. Brito IL, et al. Among authors: smillie cs. Nature. 2016 Jul 21;535(7612):435-439. doi: 10.1038/nature18927. Epub 2016 Jul 13. Nature. 2016. PMID: 27409808 Free PMC article.

8

Genome and sequence determinants governing the expression of horizontally acquired DNA in bacteria.

Gomes ALC, Johns NI, Yang A, Velez-Cortes F, Smillie CS, Smith MB, Alm EJ, Wang HH. Gomes ALC, et al. Among authors: smillie cs. ISME J. 2020 Sep;14(9):2347-2357. doi: 10.1038/s41396-020-0696-1. Epub 2020 Jun 8. ISME J. 2020. PMID: 32514119 Free PMC article.

9

The Microbial Olympics 2016.

Nelson MB, Chase AB, Martiny JB, Stocker R, Nguyen J, Lloyd K, Oshiro RT, Kearns DB, Schneider JP, Ringel PD, Basler M, Olson CA, Vuong HE, Hsiao EY, Roller BR, Ackermann M, Smillie C, Chien D, Alm E, Jermy AJ. Nelson MB, et al. Among authors: smillie c. Nat Microbiol. 2016 Jul 26;1(8):16122. doi: 10.1038/nmicrobiol.2016.122. Nat Microbiol. 2016. PMID: 27573121 Free PMC article.

10

Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease.

Papa E, Docktor M, Smillie C, Weber S, Preheim SP, Gevers D, Giannoukos G, Ciulla D, Tabbaa D, Ingram J, Schauer DB, Ward DV, Korzenik JR, Xavier RJ, Bousvaros A, Alm EJ. Papa E, et al. Among authors: smillie c. PLoS One. 2012;7(6):e39242. doi: 10.1371/journal.pone.0039242. Epub 2012 Jun 29. PLoS One. 2012. PMID: 22768065 Free PMC article.

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