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BioSimulators: a central registry of simulation engines and services for recommending specific tools.
Shaikh B, Smith LP, Vasilescu D, Marupilla G, Wilson M, Agmon E, Agnew H, Andrews SS, Anwar A, Beber ME, Bergmann FT, Brooks D, Brusch L, Calzone L, Choi K, Cooper J, Detloff J, Drawert B, Dumontier M, Ermentrout GB, Faeder JR, Freiburger AP, Fröhlich F, Funahashi A, Garny A, Gennari JH, Gleeson P, Goelzer A, Haiman Z, Hasenauer J, Hellerstein JL, Hermjakob H, Hoops S, Ison JC, Jahn D, Jakubowski HV, Jordan R, Kalaš M, König M, Liebermeister W, Sheriff RSM, Mandal S, McDougal R, Medley JK, Mendes P, Müller R, Myers CJ, Naldi A, Nguyen TVN, Nickerson DP, Olivier BG, Patoliya D, Paulevé L, Petzold LR, Priya A, Rampadarath AK, Rohwer JM, Saglam AS, Singh D, Sinha A, Snoep J, Sorby H, Spangler R, Starruß J, Thomas PJ, van Niekerk D, Weindl D, Zhang F, Zhukova A, Goldberg AP, Schaff JC, Blinov ML, Sauro HM, Moraru II, Karr JR. Shaikh B, et al. Among authors: singh d. Nucleic Acids Res. 2022 Jul 5;50(W1):W108-W114. doi: 10.1093/nar/gkac331. Nucleic Acids Res. 2022. PMID: 35524558 Free PMC article.
Python interfaces for the Smoldyn simulator.
Singh D, Andrews SS. Singh D, et al. Bioinformatics. 2021 Dec 22;38(1):291-293. doi: 10.1093/bioinformatics/btab530. Bioinformatics. 2021. PMID: 34293100
Novel oceanic cyanobacterium isolated from Bangaram island with profound acid neutralizing ability is proposed as Leptolyngbya iicbica sp. Nov. strain LK.
Dutta S, Kothari S, Singh D, Ghosh S, Narayan Sarangi A, Sanjita Behera S, Prajapati S, Kumar Sinha P, Prusty A, Tripathy S. Dutta S, et al. Among authors: singh d. Mol Phylogenet Evol. 2024 May 7:108092. doi: 10.1016/j.ympev.2024.108092. Online ahead of print. Mol Phylogenet Evol. 2024. PMID: 38723790
Identification of new stable resistant sources and assessing agro-morphological performance of sponge gourd germplasm against Tomato Leaf curl New Delhi Virus incidence.
Singh J, Munshi AD, Singh D, Meena BR, Singh AK, Nagar A, Lyngdoh YA, Tomar BS, Dey SS, Ranjan JK, Singh N, Kumar N, Mahajani K. Singh J, et al. Among authors: singh d. Front Plant Sci. 2024 Apr 24;15:1373352. doi: 10.3389/fpls.2024.1373352. eCollection 2024. Front Plant Sci. 2024. PMID: 38721333 Free PMC article.
7,627 results