Sindi SS - Search Results

1

Inferring gene regulatory networks using transcriptional profiles as dynamical attractors.

Li R, Rozum JC, Quail MM, Qasim MN, Sindi SS, Nobile CJ, Albert R, Hernday AD. Li R, et al. Among authors: sindi ss. PLoS Comput Biol. 2023 Aug 22;19(8):e1010991. doi: 10.1371/journal.pcbi.1010991. eCollection 2023 Aug. PLoS Comput Biol. 2023. PMID: 37607190 Free PMC article.

2

Going through phages: a computational approach to revealing the role of prophage in Staphylococcus aureus.

Sweet T Jr, Sindi S, Sistrom M. Sweet T Jr, et al. Access Microbiol. 2023 Jun 16;5(6):acmi000424. doi: 10.1099/acmi.0.000424. eCollection 2023. Access Microbiol. 2023. PMID: 37424556 Free PMC article.

3

Correction: To isolate or not to isolate: the impact of changing behavior on COVID-19 transmission.

Agusto FB, Erovenko IV, Fulk A, Abu-Saymeh Q, Romero-Alvarez D, Ponce J, Sindi S, Ortega O, Saint Onge JM, Peterson AT. Agusto FB, et al. BMC Public Health. 2022 Nov 11;22(1):2065. doi: 10.1186/s12889-022-14406-z. BMC Public Health. 2022. PMID: 36369008 Free PMC article. No abstract available.

4

Host tracheal and intestinal microbiomes inhibit Coccidioides growth in vitro.

Tejeda-Garibay S, Zhao L, Hum NR, Pimentel M, Diep AL, Amiri B, Sindi SS, Weilhammer DR, Loots GG, Hoyer KK. Tejeda-Garibay S, et al. Among authors: sindi ss. bioRxiv [Preprint]. 2023 Oct 23:2023.10.23.563655. doi: 10.1101/2023.10.23.563655. bioRxiv. 2023. PMID: 37961490 Free PMC article. Preprint.

5

Boosting Single-Cell RNA Sequencing Analysis with Simple Neural Attention.

Davalos OA, Heydari AA, Fertig EJ, Sindi SS, Hoyer KK. Davalos OA, et al. Among authors: sindi ss. bioRxiv [Preprint]. 2023 Jun 1:2023.05.29.542760. doi: 10.1101/2023.05.29.542760. bioRxiv. 2023. PMID: 37398136 Free PMC article. Preprint.

6

A Computational Workflow for Analysis of 3' Tag-Seq Data.

Paropkari AD, Bapat PS, Sindi SS, Nobile CJ. Paropkari AD, et al. Among authors: sindi ss. Curr Protoc. 2023 Feb;3(2):e664. doi: 10.1002/cpz1.664. Curr Protoc. 2023. PMID: 36779816 Free PMC article.

7

Deep learning in spatial transcriptomics: Learning from the next next-generation sequencing.

Heydari AA, Sindi SS. Heydari AA, et al. Among authors: sindi ss. Biophys Rev (Melville). 2023 Feb 7;4(1):011306. doi: 10.1063/5.0091135. eCollection 2023 Mar. Biophys Rev (Melville). 2023. PMID: 38505815 Free PMC article. Review.

8

Modeling and Global Sensitivity Analysis of Strategies to Mitigate Covid-19 Transmission on a Structured College Campus.

Zhao L, Santiago F, Rutter EM, Khatri S, Sindi SS. Zhao L, et al. Among authors: sindi ss. Bull Math Biol. 2023 Jan 13;85(2):13. doi: 10.1007/s11538-022-01107-2. Bull Math Biol. 2023. PMID: 36637563 Free PMC article.

9

Genome-wide Profiling of Transcription Factor-DNA Binding Interactions in Candida albicans: A Comprehensive CUT&RUN Method and Data Analysis Workflow.

Qasim MN, Valle Arevalo A, Paropkari AD, Ennis CL, Sindi SS, Nobile CJ, Hernday AD. Qasim MN, et al. Among authors: sindi ss. J Vis Exp. 2022 Apr 1;(182):10.3791/63655. doi: 10.3791/63655. J Vis Exp. 2022. PMID: 35435920 Free PMC article.

10

ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective variational autoencoders.

Heydari AA, Davalos OA, Zhao L, Hoyer KK, Sindi SS. Heydari AA, et al. Among authors: sindi ss. Bioinformatics. 2022 Apr 12;38(8):2194-2201. doi: 10.1093/bioinformatics/btac095. Bioinformatics. 2022. PMID: 35179571 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

37 results

Search Page