Sindi SS - Search Results

1

AddTag, a two-step approach with supporting software package that facilitates CRISPR/Cas-mediated precision genome editing.

Seher TD, Nguyen N, Ramos D, Bapat P, Nobile CJ, Sindi SS, Hernday AD. Seher TD, et al. Among authors: sindi ss. G3 (Bethesda). 2021 Sep 6;11(9):jkab216. doi: 10.1093/g3journal/jkab216. G3 (Bethesda). 2021. PMID: 34544122 Free PMC article.

2

Genome-wide Profiling of Transcription Factor-DNA Binding Interactions in Candida albicans: A Comprehensive CUT&RUN Method and Data Analysis Workflow.

Qasim MN, Valle Arevalo A, Paropkari AD, Ennis CL, Sindi SS, Nobile CJ, Hernday AD. Qasim MN, et al. Among authors: sindi ss. J Vis Exp. 2022 Apr 1;(182):10.3791/63655. doi: 10.3791/63655. J Vis Exp. 2022. PMID: 35435920 Free PMC article.

3

A Computational Workflow for Analysis of 3' Tag-Seq Data.

Paropkari AD, Bapat PS, Sindi SS, Nobile CJ. Paropkari AD, et al. Among authors: sindi ss. Curr Protoc. 2023 Feb;3(2):e664. doi: 10.1002/cpz1.664. Curr Protoc. 2023. PMID: 36779816 Free PMC article.

4

Evidence for Prescribed NK Cell Ly-49 Developmental Pathways in Mice.

Millan AJ, Hom BA, Libang JB, Sindi S, Manilay JO. Millan AJ, et al. J Immunol. 2021 Mar 15;206(6):1215-1227. doi: 10.4049/jimmunol.2000613. Epub 2021 Jan 25. J Immunol. 2021. PMID: 33495236

5

A geometric approach for classification and comparison of structural variants.

Sindi S, Helman E, Bashir A, Raphael BJ. Sindi S, et al. Bioinformatics. 2009 Jun 15;25(12):i222-30. doi: 10.1093/bioinformatics/btp208. Bioinformatics. 2009. PMID: 19477992 Free PMC article.

6

CD8 Follicular T Cells Promote B Cell Antibody Class Switch in Autoimmune Disease.

Valentine KM, Davini D, Lawrence TJ, Mullins GN, Manansala M, Al-Kuhlani M, Pinney JM, Davis JK, Beaudin AE, Sindi SS, Gravano DM, Hoyer KK. Valentine KM, et al. Among authors: sindi ss. J Immunol. 2018 Jul 1;201(1):31-40. doi: 10.4049/jimmunol.1701079. Epub 2018 May 9. J Immunol. 2018. PMID: 29743314 Free PMC article.

7

Detecting inherited and novel structural variants in low-coverage parent-child sequencing data.

Spence M, Banuelos M, Marcia RF, Sindi S. Spence M, et al. Methods. 2020 Feb 15;173:61-68. doi: 10.1016/j.ymeth.2019.06.025. Epub 2019 Jul 2. Methods. 2020. PMID: 31271880

8

Distribution of β-Lactamase Genes in Clinical Isolates from California Central Valley Hospital Deviates from the United States Nationwide Trends.

Guzman-Cole C, Santiago F, Garsevanyan S, Sindi S, Barlow M. Guzman-Cole C, et al. Antibiotics (Basel). 2021 Apr 27;10(5):498. doi: 10.3390/antibiotics10050498. Antibiotics (Basel). 2021. PMID: 33925352 Free PMC article.

9

Characterization of structural variants with single molecule and hybrid sequencing approaches.

Ritz A, Bashir A, Sindi S, Hsu D, Hajirasouliha I, Raphael BJ. Ritz A, et al. Bioinformatics. 2014 Dec 15;30(24):3458-66. doi: 10.1093/bioinformatics/btu714. Epub 2014 Oct 28. Bioinformatics. 2014. PMID: 25355789 Free PMC article.

10

ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective variational autoencoders.

Heydari AA, Davalos OA, Zhao L, Hoyer KK, Sindi SS. Heydari AA, et al. Among authors: sindi ss. Bioinformatics. 2022 Apr 12;38(8):2194-2201. doi: 10.1093/bioinformatics/btac095. Bioinformatics. 2022. PMID: 35179571 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

52 results

Search Page