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The interplay between neoantigens and immune cells in sarcomas treated with checkpoint inhibition.
Front Immunol. 2023 Sep 20;14:1226445. doi: 10.3389/fimmu.2023.1226445. eCollection 2023.
Front Immunol. 2023.
PMID: 37799721
Free PMC article.
Author Correction: European primary forest database v2.0.
Sabatini FM, Bluhm H, Kun Z, Aksenov D, Atauri JA, Buchwald E, Burrascano S, Cateau E, Diku A, Duarte IM, Fernández López ÁB, Garbarino M, Grigoriadis N, Horváth F, Keren S, Kitenberga M, Kiš A, Kraut A, Ibisch PL, Larrieu L, Lombardi F, Matovic B, Melu RN, Meyer P, Midteng R, Mikac S, Mikoláš M, Mozgeris G, Panayotov M, Pisek R, Nunes L, Ruete A, Schickhofer M, Simovski B, Stillhard J, Stojanovic D, Szwagrzyk J, Tikkanen OP, Toromani E, Volosyanchuk R, Vrška T, Waldherr M, Yermokhin M, Zlatanov T, Zagidullina A, Kuemmerle T.
Sabatini FM, et al. Among authors: simovski b.
Sci Data. 2021 Sep 20;8(1):249. doi: 10.1038/s41597-021-01036-0.
Sci Data. 2021.
PMID: 34545096
Free PMC article.
No abstract available.
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European primary forest database v2.0.
Sabatini FM, Bluhm H, Kun Z, Aksenov D, Atauri JA, Buchwald E, Burrascano S, Cateau E, Diku A, Duarte IM, Fernández López ÁB, Garbarino M, Grigoriadis N, Horváth F, Keren S, Kitenberga M, Kiš A, Kraut A, Ibisch PL, Larrieu L, Lombardi F, Matovic B, Melu RN, Meyer P, Midteng R, Mikac S, Mikoláš M, Mozgeris G, Panayotov M, Pisek R, Nunes L, Ruete A, Schickhofer M, Simovski B, Stillhard J, Stojanovic D, Szwagrzyk J, Tikkanen OP, Toromani E, Volosyanchuk R, Vrška T, Waldherr M, Yermokhin M, Zlatanov T, Zagidullina A, Kuemmerle T.
Sabatini FM, et al. Among authors: simovski b.
Sci Data. 2021 Aug 17;8(1):220. doi: 10.1038/s41597-021-00988-7.
Sci Data. 2021.
PMID: 34404811
Free PMC article.
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Artificial intelligence predicts the immunogenic landscape of SARS-CoV-2 leading to universal blueprints for vaccine designs.
Malone B, Simovski B, Moliné C, Cheng J, Gheorghe M, Fontenelle H, Vardaxis I, Tennøe S, Malmberg JA, Stratford R, Clancy T.
Malone B, et al. Among authors: simovski b.
Sci Rep. 2020 Dec 23;10(1):22375. doi: 10.1038/s41598-020-78758-5.
Sci Rep. 2020.
PMID: 33361777
Free PMC article.
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Mind the gaps: overlooking inaccessible regions confounds statistical testing in genome analysis.
Domanska D, Kanduri C, Simovski B, Sandve GK.
Domanska D, et al. Among authors: simovski b.
BMC Bioinformatics. 2018 Dec 14;19(1):481. doi: 10.1186/s12859-018-2438-1.
BMC Bioinformatics. 2018.
PMID: 30547739
Free PMC article.
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Coloc-stats: a unified web interface to perform colocalization analysis of genomic features.
Simovski B, Kanduri C, Gundersen S, Titov D, Domanska D, Bock C, Bossini-Castillo L, Chikina M, Favorov A, Layer RM, Mironov AA, Quinlan AR, Sheffield NC, Trynka G, Sandve GK.
Simovski B, et al.
Nucleic Acids Res. 2018 Jul 2;46(W1):W186-W193. doi: 10.1093/nar/gky474.
Nucleic Acids Res. 2018.
PMID: 29873782
Free PMC article.
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GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome.
Simovski B, Vodák D, Gundersen S, Domanska D, Azab A, Holden L, Holden M, Grytten I, Rand K, Drabløs F, Johansen M, Mora A, Lund-Andersen C, Fromm B, Eskeland R, Gabrielsen OS, Ferkingstad E, Nakken S, Bengtsen M, Nederbragt AJ, Thorarensen HS, Akse JA, Glad I, Hovig E, Sandve GK.
Simovski B, et al.
Gigascience. 2017 Jul 1;6(7):1-12. doi: 10.1093/gigascience/gix032.
Gigascience. 2017.
PMID: 28459977
Free PMC article.
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ClusTrack: feature extraction and similarity measures for clustering of genome-wide data sets.
Rydbeck H, Sandve GK, Ferkingstad E, Simovski B, Rye M, Hovig E.
Rydbeck H, et al. Among authors: simovski b.
PLoS One. 2015 Apr 16;10(4):e0123261. doi: 10.1371/journal.pone.0123261. eCollection 2015.
PLoS One. 2015.
PMID: 25879845
Free PMC article.
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