Siebert JC - Search Results

1

VOLARE: visual analysis of disease-associated microbiome-immune system interplay.

Siebert JC, Neff CP, Schneider JM, Regner EH, Ohri N, Kuhn KA, Palmer BE, Lozupone CA, Görg C. Siebert JC, et al. BMC Bioinformatics. 2019 Aug 20;20(1):432. doi: 10.1186/s12859-019-3021-0. BMC Bioinformatics. 2019. PMID: 31429723 Free PMC article.

2

Functional intraepithelial lymphocyte changes in inflammatory bowel disease and spondyloarthritis have disease specific correlations with intestinal microbiota.

Regner EH, Ohri N, Stahly A, Gerich ME, Fennimore BP, Ir D, Jubair WK, Görg C, Siebert J, Robertson CE, Caplan L, Frank DN, Kuhn KA. Regner EH, et al. Arthritis Res Ther. 2018 Jul 20;20(1):149. doi: 10.1186/s13075-018-1639-3. Arthritis Res Ther. 2018. PMID: 30029674 Free PMC article.

3

Early-onset autoimmune vitiligo associated with an enhancer variant haplotype that upregulates class II HLA expression.

Jin Y, Roberts GHL, Ferrara TM, Ben S, van Geel N, Wolkerstorfer A, Ezzedine K, Siebert J, Neff CP, Palmer BE, Santorico SA, Spritz RA. Jin Y, et al. Nat Commun. 2019 Jan 23;10(1):391. doi: 10.1038/s41467-019-08337-4. Nat Commun. 2019. PMID: 30674883 Free PMC article.

4

Visualizing microbiome-immune system interplay.

Siebert JC, Görg C, Palmer B, Lozupone C. Siebert JC, et al. Immunotherapy. 2019 Feb;11(2):63-67. doi: 10.2217/imt-2018-0138. Immunotherapy. 2019. PMID: 30730269 Free PMC article. No abstract available.

5

HIV Infection Is Associated with Loss of Anti-Inflammatory Alveolar Macrophages.

Neff CP, Atif SM, Logue EC, Siebert J, Görg C, Lavelle J, Fiorillo S, Twigg H, Campbell TB, Fontenot AP, Palmer BE. Neff CP, et al. J Immunol. 2020 Nov 1;205(9):2447-2455. doi: 10.4049/jimmunol.2000361. Epub 2020 Sep 14. J Immunol. 2020. PMID: 32929038 Free PMC article.

6

CANTARE: finding and visualizing network-based multi-omic predictive models.

Siebert JC, Saint-Cyr M, Borengasser SJ, Wagner BD, Lozupone CA, Görg C. Siebert JC, et al. BMC Bioinformatics. 2021 Feb 19;22(1):80. doi: 10.1186/s12859-021-04016-8. BMC Bioinformatics. 2021. PMID: 33607938 Free PMC article.

7

Multiomic Predictors of Short-Term Weight Loss and Clinical Outcomes During a Behavioral-Based Weight Loss Intervention.

Siebert JC, Stanislawski MA, Zaman A, Ostendorf DM, Konigsberg IR, Jambal P, Ir D, Bing K, Wayland L, Scorsone JJ, Lozupone CA, Görg C, Frank DN, Bessesen D, MacLean PS, Melanson EL, Catenacci VA, Borengasser SJ. Siebert JC, et al. Obesity (Silver Spring). 2021 May;29(5):859-869. doi: 10.1002/oby.23127. Epub 2021 Apr 3. Obesity (Silver Spring). 2021. PMID: 33811477 Free PMC article.

8

Elevated inflammatory fecal immune factors in men who have sex with men with HIV associate with microbiome composition and gut barrier function.

Littlefield KM, Schneider JM, Neff CP, Soesanto V, Siebert JC, Nusbacher NM, Moreno-Huizar N, Cartwright IM, Armstrong AJS, Colgen SP, Lozupone CA, Palmer BE. Littlefield KM, et al. Among authors: siebert jc. Front Immunol. 2022 Dec 20;13:1072720. doi: 10.3389/fimmu.2022.1072720. eCollection 2022. Front Immunol. 2022. PMID: 36605218 Free PMC article.

9

An analytical workflow for investigating cytokine profiles.

Siebert JC, Inokuma M, Waid DM, Pennock ND, Vaitaitis GM, Disis ML, Dunne JF, Wagner DH Jr, Maecker HT. Siebert JC, et al. Cytometry A. 2008 Apr;73(4):289-98. doi: 10.1002/cyto.a.20509. Cytometry A. 2008. PMID: 18163472 Free article.

10

Integrating and mining diverse data in human immunological studies.

Siebert JC, Wagner BD, Juarez-Colunga E. Siebert JC, et al. Bioanalysis. 2014 Jan;6(2):209-23. doi: 10.4155/bio.13.309. Bioanalysis. 2014. PMID: 24423597 Free article. Review.

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