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B-cell epitopes: Discontinuity and conformational analysis.
Ferdous S, Kelm S, Baker TS, Shi J, Martin ACR. Ferdous S, et al. Among authors: shi j. Mol Immunol. 2019 Oct;114:643-650. doi: 10.1016/j.molimm.2019.09.014. Epub 2019 Sep 20. Mol Immunol. 2019. PMID: 31546099
iMembrane: homology-based membrane-insertion of proteins.
Kelm S, Shi J, Deane CM. Kelm S, et al. Among authors: shi j. Bioinformatics. 2009 Apr 15;25(8):1086-8. doi: 10.1093/bioinformatics/btp102. Epub 2009 Feb 23. Bioinformatics. 2009. PMID: 19237449 Free PMC article.
Memoir: template-based structure prediction for membrane proteins.
Ebejer JP, Hill JR, Kelm S, Shi J, Deane CM. Ebejer JP, et al. Among authors: shi j. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W379-83. doi: 10.1093/nar/gkt331. Epub 2013 May 2. Nucleic Acids Res. 2013. PMID: 23640332 Free PMC article.
SAbDab: the structural antibody database.
Dunbar J, Krawczyk K, Leem J, Baker T, Fuchs A, Georges G, Shi J, Deane CM. Dunbar J, et al. Among authors: shi j. Nucleic Acids Res. 2014 Jan;42(Database issue):D1140-6. doi: 10.1093/nar/gkt1043. Epub 2013 Nov 8. Nucleic Acids Res. 2014. PMID: 24214988 Free PMC article.
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