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Page 1
Helium: visualization of large scale plant pedigrees.
Shaw PD, Graham M, Kennedy J, Milne I, Marshall DF. Shaw PD, et al. BMC Bioinformatics. 2014 Aug 1;15(1):259. doi: 10.1186/1471-2105-15-259. BMC Bioinformatics. 2014. PMID: 25085009 Free PMC article.
BrAPI-an application programming interface for plant breeding applications.
Selby P, Abbeloos R, Backlund JE, Basterrechea Salido M, Bauchet G, Benites-Alfaro OE, Birkett C, Calaminos VC, Carceller P, Cornut G, Vasques Costa B, Edwards JD, Finkers R, Yanxin Gao S, Ghaffar M, Glaser P, Guignon V, Hok P, Kilian A, König P, Lagare JEB, Lange M, Laporte MA, Larmande P, LeBauer DS, Lyon DA, Marshall DS, Matthews D, Milne I, Mistry N, Morales N, Mueller LA, Neveu P, Papoutsoglou E, Pearce B, Perez-Masias I, Pommier C, Ramírez-González RH, Rathore A, Raquel AM, Raubach S, Rife T, Robbins K, Rouard M, Sarma C, Scholz U, Sempéré G, Shaw PD, Simon R, Soldevilla N, Stephen G, Sun Q, Tovar C, Uszynski G, Verouden M; BrAPI consortium. Selby P, et al. Among authors: shaw pd. Bioinformatics. 2019 Oct 15;35(20):4147-4155. doi: 10.1093/bioinformatics/btz190. Bioinformatics. 2019. PMID: 30903186 Free PMC article.
Diversity analysis of 80,000 wheat accessions reveals consequences and opportunities of selection footprints.
Sansaloni C, Franco J, Santos B, Percival-Alwyn L, Singh S, Petroli C, Campos J, Dreher K, Payne T, Marshall D, Kilian B, Milne I, Raubach S, Shaw P, Stephen G, Carling J, Pierre CS, Burgueño J, Crosa J, Li H, Guzman C, Kehel Z, Amri A, Kilian A, Wenzl P, Uauy C, Banziger M, Caccamo M, Pixley K. Sansaloni C, et al. Nat Commun. 2020 Sep 11;11(1):4572. doi: 10.1038/s41467-020-18404-w. Nat Commun. 2020. PMID: 32917907 Free PMC article.
Towards smart and sustainable development of modern berry cultivars in Europe.
Senger E, Osorio S, Olbricht K, Shaw P, Denoyes B, Davik J, Predieri S, Karhu S, Raubach S, Lippi N, Höfer M, Cockerton H, Pradal C, Kafkas E, Litthauer S, Amaya I, Usadel B, Mezzetti B. Senger E, et al. Plant J. 2022 Sep;111(5):1238-1251. doi: 10.1111/tpj.15876. Epub 2022 Aug 5. Plant J. 2022. PMID: 35751152 Free article. Review.
Unlocking the genetic diversity and population structure of the newly introduced two-row spring European HerItage Barley collecTion (ExHIBiT).
Bernád V, Al-Tamimi N, Langan P, Gillespie G, Dempsey T, Henchy J, Harty M, Ramsay L, Houston K, Macaulay M, Shaw PD, Raubach S, Mcdonnel KP, Russell J, Waugh R, Khodaeiaminjan M, Negrão S. Bernád V, et al. Among authors: shaw pd. Front Plant Sci. 2024 Mar 20;15:1268847. doi: 10.3389/fpls.2024.1268847. eCollection 2024. Front Plant Sci. 2024. PMID: 38571708 Free PMC article.
Flapjack--graphical genotype visualization.
Milne I, Shaw P, Stephen G, Bayer M, Cardle L, Thomas WT, Flavell AJ, Marshall D. Milne I, et al. Bioinformatics. 2010 Dec 15;26(24):3133-4. doi: 10.1093/bioinformatics/btq580. Epub 2010 Oct 18. Bioinformatics. 2010. PMID: 20956241 Free PMC article.
Tablet--next generation sequence assembly visualization.
Milne I, Bayer M, Cardle L, Shaw P, Stephen G, Wright F, Marshall D. Milne I, et al. Bioinformatics. 2010 Feb 1;26(3):401-2. doi: 10.1093/bioinformatics/btp666. Epub 2009 Dec 4. Bioinformatics. 2010. PMID: 19965881 Free PMC article.
52 results