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BrAPI-an application programming interface for plant breeding applications.
Selby P, Abbeloos R, Backlund JE, Basterrechea Salido M, Bauchet G, Benites-Alfaro OE, Birkett C, Calaminos VC, Carceller P, Cornut G, Vasques Costa B, Edwards JD, Finkers R, Yanxin Gao S, Ghaffar M, Glaser P, Guignon V, Hok P, Kilian A, König P, Lagare JEB, Lange M, Laporte MA, Larmande P, LeBauer DS, Lyon DA, Marshall DS, Matthews D, Milne I, Mistry N, Morales N, Mueller LA, Neveu P, Papoutsoglou E, Pearce B, Perez-Masias I, Pommier C, Ramírez-González RH, Rathore A, Raquel AM, Raubach S, Rife T, Robbins K, Rouard M, Sarma C, Scholz U, Sempéré G, Shaw PD, Simon R, Soldevilla N, Stephen G, Sun Q, Tovar C, Uszynski G, Verouden M; BrAPI consortium. Selby P, et al. Among authors: sempere g. Bioinformatics. 2019 Oct 15;35(20):4147-4155. doi: 10.1093/bioinformatics/btz190. Bioinformatics. 2019. PMID: 30903186 Free PMC article.
Gigwa-Genotype investigator for genome-wide analyses.
Sempéré G, Philippe F, Dereeper A, Ruiz M, Sarah G, Larmande P. Sempéré G, et al. Gigascience. 2016 Jun 6;5:25. doi: 10.1186/s13742-016-0131-8. Gigascience. 2016. PMID: 27267926 Free PMC article.
Erratum to: Gigwa-Genotype investigator for genome-wide analyses.
Sempéré G, Philippe F, Dereeper A, Ruiz M, Sarah G, Larmande P. Sempéré G, et al. Gigascience. 2016 Nov 2;5(1):48. doi: 10.1186/s13742-016-0153-2. Gigascience. 2016. PMID: 27806726 Free PMC article. No abstract available.
Gigwa v2-Extended and improved genotype investigator.
Sempéré G, Pétel A, Rouard M, Frouin J, Hueber Y, De Bellis F, Larmande P. Sempéré G, et al. Gigascience. 2019 May 1;8(5):giz051. doi: 10.1093/gigascience/giz051. Gigascience. 2019. PMID: 31077313 Free PMC article.
Benchmarking database systems for Genomic Selection implementation.
Nti-Addae Y, Matthews D, Ulat VJ, Syed R, Sempéré G, Pétel A, Renner J, Larmande P, Guignon V, Jones E, Robbins K. Nti-Addae Y, et al. Among authors: sempere g. Database (Oxford). 2019 Jan 1;2019:baz096. doi: 10.1093/database/baz096. Database (Oxford). 2019. PMID: 31508797 Free PMC article.
Managing High-Density Genotyping Data with Gigwa.
Sempéré G, Larmande P, Rouard M. Sempéré G, et al. Methods Mol Biol. 2022;2443:415-427. doi: 10.1007/978-1-0716-2067-0_21. Methods Mol Biol. 2022. PMID: 35037218
The banana genome hub: a community database for genomics in the Musaceae.
Droc G, Martin G, Guignon V, Summo M, Sempéré G, Durant E, Soriano A, Baurens FC, Cenci A, Breton C, Shah T, Aury JM, Ge XJ, Harrison PH, Yahiaoui N, D'Hont A, Rouard M. Droc G, et al. Among authors: sempere g. Hortic Res. 2022 Sep 28;9:uhac221. doi: 10.1093/hr/uhac221. eCollection 2022. Hortic Res. 2022. PMID: 36479579 Free PMC article.
MGIS: managing banana (Musa spp.) genetic resources information and high-throughput genotyping data.
Ruas M, Guignon V, Sempere G, Sardos J, Hueber Y, Duvergey H, Andrieu A, Chase R, Jenny C, Hazekamp T, Irish B, Jelali K, Adeka J, Ayala-Silva T, Chao CP, Daniells J, Dowiya B, Effa Effa B, Gueco L, Herradura L, Ibobondji L, Kempenaers E, Kilangi J, Muhangi S, Ngo Xuan P, Paofa J, Pavis C, Thiemele D, Tossou C, Sandoval J, Sutanto A, Vangu Paka G, Yi G, Van den Houwe I, Roux N, Rouard M. Ruas M, et al. Among authors: sempere g. Database (Oxford). 2017 Jan 1;2017:bax046. doi: 10.1093/database/bax046. Database (Oxford). 2017. PMID: 29220435 Free PMC article.
24 results