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Revealing strengths and weaknesses of methods for gene network inference.
Marbach D, Prill RJ, Schaffter T, Mattiussi C, Floreano D, Stolovitzky G. Marbach D, et al. Among authors: schaffter t. Proc Natl Acad Sci U S A. 2010 Apr 6;107(14):6286-91. doi: 10.1073/pnas.0913357107. Epub 2010 Mar 22. Proc Natl Acad Sci U S A. 2010. PMID: 20308593 Free PMC article.
Evaluation of Combined Artificial Intelligence and Radiologist Assessment to Interpret Screening Mammograms.
Schaffter T, Buist DSM, Lee CI, Nikulin Y, Ribli D, Guan Y, Lotter W, Jie Z, Du H, Wang S, Feng J, Feng M, Kim HE, Albiol F, Albiol A, Morrell S, Wojna Z, Ahsen ME, Asif U, Jimeno Yepes A, Yohanandan S, Rabinovici-Cohen S, Yi D, Hoff B, Yu T, Chaibub Neto E, Rubin DL, Lindholm P, Margolies LR, McBride RB, Rothstein JH, Sieh W, Ben-Ari R, Harrer S, Trister A, Friend S, Norman T, Sahiner B, Strand F, Guinney J, Stolovitzky G; and the DM DREAM Consortium; Mackey L, Cahoon J, Shen L, Sohn JH, Trivedi H, Shen Y, Buturovic L, Pereira JC, Cardoso JS, Castro E, Kalleberg KT, Pelka O, Nedjar I, Geras KJ, Nensa F, Goan E, Koitka S, Caballero L, Cox DD, Krishnaswamy P, Pandey G, Friedrich CM, Perrin D, Fookes C, Shi B, Cardoso Negrie G, Kawczynski M, Cho K, Khoo CS, Lo JY, Sorensen AG, Jung H. Schaffter T, et al. JAMA Netw Open. 2020 Mar 2;3(3):e200265. doi: 10.1001/jamanetworkopen.2020.0265. JAMA Netw Open. 2020. PMID: 32119094 Free PMC article.
Evaluation of artificial intelligence systems for assisting neurologists with fast and accurate annotations of scalp electroencephalography data.
Roy S, Kiral I, Mirmomeni M, Mummert T, Braz A, Tsay J, Tang J, Asif U, Schaffter T, Ahsen ME, Iwamori T, Yanagisawa H, Poonawala H, Madan P, Qin Y, Picone J, Obeid I, Marques BA, Maetschke S, Khalaf R, Rosen-Zvi M, Stolovitzky G, Harrer S; IBM Epilepsy Consortium. Roy S, et al. Among authors: schaffter t. EBioMedicine. 2021 Apr;66:103275. doi: 10.1016/j.ebiom.2021.103275. Epub 2021 Mar 18. EBioMedicine. 2021. PMID: 33745882 Free PMC article.
A Continuously Benchmarked and Crowdsourced Challenge for Rapid Development and Evaluation of Models to Predict COVID-19 Diagnosis and Hospitalization.
Yan Y, Schaffter T, Bergquist T, Yu T, Prosser J, Aydin Z, Jabeer A, Brugere I, Gao J, Chen G, Causey J, Yao Y, Bryson K, Long DR, Jarvik JG, Lee CI, Wilcox A, Guinney J, Mooney S; DREAM Challenge Consortium. Yan Y, et al. Among authors: schaffter t. JAMA Netw Open. 2021 Oct 1;4(10):e2124946. doi: 10.1001/jamanetworkopen.2021.24946. JAMA Netw Open. 2021. PMID: 34633425 Free PMC article.
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