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Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes.
De Maio N, Shaw LP, Hubbard A, George S, Sanderson ND, Swann J, Wick R, AbuOun M, Stubberfield E, Hoosdally SJ, Crook DW, Peto TEA, Sheppard AE, Bailey MJ, Read DS, Anjum MF, Walker AS, Stoesser N, On Behalf Of The Rehab Consortium. De Maio N, et al. Among authors: sanderson nd. Microb Genom. 2019 Sep;5(9):e000294. doi: 10.1099/mgen.0.000294. Epub 2019 Aug 30. Microb Genom. 2019. PMID: 31483244 Free PMC article.
DNA extraction from primary liquid blood cultures for bloodstream infection diagnosis using whole genome sequencing.
Anson LW, Chau K, Sanderson N, Hoosdally S, Bradley P, Iqbal Z, Phan H, Foster D, Oakley S, Morgan M, Peto TEA, Modernizing Medical Microbiology Informatics Group Mmmig, Crook DW, Pankhurst LJ. Anson LW, et al. J Med Microbiol. 2018 Mar;67(3):347-357. doi: 10.1099/jmm.0.000664. Epub 2018 Jan 10. J Med Microbiol. 2018. PMID: 29458686 Free PMC article.
Gonorrhoea treatment failure caused by a Neisseria gonorrhoeae strain with combined ceftriaxone and high-level azithromycin resistance, England, February 2018.
Eyre DW, Sanderson ND, Lord E, Regisford-Reimmer N, Chau K, Barker L, Morgan M, Newnham R, Golparian D, Unemo M, Crook DW, Peto TE, Hughes G, Cole MJ, Fifer H, Edwards A, Andersson MI. Eyre DW, et al. Among authors: sanderson nd. Euro Surveill. 2018 Jul;23(27):1800323. doi: 10.2807/1560-7917.ES.2018.23.27.1800323. Euro Surveill. 2018. PMID: 29991383 Free PMC article.
Panton-Valentine leucocidin is the key determinant of Staphylococcus aureus pyomyositis in a bacterial GWAS.
Young BC, Earle SG, Soeng S, Sar P, Kumar V, Hor S, Sar V, Bousfield R, Sanderson ND, Barker L, Stoesser N, Emary KR, Parry CM, Nickerson EK, Turner P, Bowden R, Crook DW, Wyllie DH, Day NP, Wilson DJ, Moore CE. Young BC, et al. Among authors: sanderson nd. Elife. 2019 Feb 22;8:e42486. doi: 10.7554/eLife.42486. Elife. 2019. PMID: 30794157 Free PMC article.
Metagenomic Nanopore Sequencing of Influenza Virus Direct from Clinical Respiratory Samples.
Lewandowski K, Xu Y, Pullan ST, Lumley SF, Foster D, Sanderson N, Vaughan A, Morgan M, Bright N, Kavanagh J, Vipond R, Carroll M, Marriott AC, Gooch KE, Andersson M, Jeffery K, Peto TEA, Crook DW, Walker AS, Matthews PC. Lewandowski K, et al. J Clin Microbiol. 2019 Dec 23;58(1):e00963-19. doi: 10.1128/JCM.00963-19. Print 2019 Dec 23. J Clin Microbiol. 2019. PMID: 31666364 Free PMC article.
Optimizing DNA Extraction Methods for Nanopore Sequencing of Neisseria gonorrhoeae Directly from Urine Samples.
Street TL, Barker L, Sanderson ND, Kavanagh J, Hoosdally S, Cole K, Newnham R, Selvaratnam M, Andersson M, Llewelyn MJ, O'Grady J, Crook DW, Eyre DW. Street TL, et al. Among authors: sanderson nd. J Clin Microbiol. 2020 Feb 24;58(3):e01822-19. doi: 10.1128/JCM.01822-19. Print 2020 Feb 24. J Clin Microbiol. 2020. PMID: 31852766 Free PMC article.
Nanopore metagenomic sequencing to investigate nosocomial transmission of human metapneumovirus from a unique genetic group among haematology patients in the United Kingdom.
Xu Y, Lewandowski K, Jeffery K, Downs LO, Foster D, Sanderson ND, Kavanagh J, Vaughan A, Salvagno C, Vipond R, Carroll M, Danby R, Peto T, Crook D, Walker AS, Matthews PC, Pullan ST. Xu Y, et al. Among authors: sanderson nd. J Infect. 2020 May;80(5):571-577. doi: 10.1016/j.jinf.2020.02.003. Epub 2020 Feb 22. J Infect. 2020. PMID: 32092386 Free article.
47 results