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A resource for large-scale RNA-interference-based screens in mammals.
Paddison PJ, Silva JM, Conklin DS, Schlabach M, Li M, Aruleba S, Balija V, O'Shaughnessy A, Gnoj L, Scobie K, Chang K, Westbrook T, Cleary M, Sachidanandam R, McCombie WR, Elledge SJ, Hannon GJ. Paddison PJ, et al. Among authors: sachidanandam r. Nature. 2004 Mar 25;428(6981):427-31. doi: 10.1038/nature02370. Nature. 2004. PMID: 15042091
Second-generation shRNA libraries covering the mouse and human genomes.
Silva JM, Li MZ, Chang K, Ge W, Golding MC, Rickles RJ, Siolas D, Hu G, Paddison PJ, Schlabach MR, Sheth N, Bradshaw J, Burchard J, Kulkarni A, Cavet G, Sachidanandam R, McCombie WR, Cleary MA, Elledge SJ, Hannon GJ. Silva JM, et al. Among authors: sachidanandam r. Nat Genet. 2005 Nov;37(11):1281-8. doi: 10.1038/ng1650. Epub 2005 Oct 2. Nat Genet. 2005. PMID: 16200065
Geoseq: a tool for dissecting deep-sequencing datasets.
Gurtowski J, Cancio A, Shah H, Levovitz C, George A, Homann R, Sachidanandam R. Gurtowski J, et al. Among authors: sachidanandam r. BMC Bioinformatics. 2010 Oct 12;11:506. doi: 10.1186/1471-2105-11-506. BMC Bioinformatics. 2010. PMID: 20939882 Free PMC article.
MiST: a new approach to variant detection in deep sequencing datasets.
Subramanian S, Di Pierro V, Shah H, Jayaprakash AD, Weisberger I, Shim J, George A, Gelb BD, Sachidanandam R. Subramanian S, et al. Among authors: sachidanandam r. Nucleic Acids Res. 2013 Sep;41(16):e154. doi: 10.1093/nar/gkt551. Epub 2013 Jul 4. Nucleic Acids Res. 2013. PMID: 23828039 Free PMC article.
143 results