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Page 1
A history of the MetaSUB consortium: Tracking urban microbes around the globe.
Ryon KA, Tierney BT, Frolova A, Kahles A, Desnues C, Ouzounis C, Gibas C, Bezdan D, Deng Y, He D, Dias-Neto E, Elhaik E, Afshin E, Grills G, Iraola G, Suzuki H, Werner J, Udekwu K, Schriml L, Bhattacharyya M, Oliveira M, Zambrano MM, Hazrin-Chong NH, Osuolale O, Łabaj PP, Tiasse P, Rapuri S, Borras S, Pozdniakova S, Shi T, Sezerman U, Rodo X, Sezer ZH, Mason CE. Ryon KA, et al. iScience. 2022 Oct 20;25(11):104993. doi: 10.1016/j.isci.2022.104993. eCollection 2022 Nov 18. iScience. 2022. PMID: 36299999 Free PMC article.
A global metagenomic map of urban microbiomes and antimicrobial resistance.
Danko D, Bezdan D, Afshin EE, Ahsanuddin S, Bhattacharya C, Butler DJ, Chng KR, Donnellan D, Hecht J, Jackson K, Kuchin K, Karasikov M, Lyons A, Mak L, Meleshko D, Mustafa H, Mutai B, Neches RY, Ng A, Nikolayeva O, Nikolayeva T, Png E, Ryon KA, Sanchez JL, Shaaban H, Sierra MA, Thomas D, Young B, Abudayyeh OO, Alicea J, Bhattacharyya M, Blekhman R, Castro-Nallar E, Cañas AM, Chatziefthimiou AD, Crawford RW, De Filippis F, Deng Y, Desnues C, Dias-Neto E, Dybwad M, Elhaik E, Ercolini D, Frolova A, Gankin D, Gootenberg JS, Graf AB, Green DC, Hajirasouliha I, Hastings JJA, Hernandez M, Iraola G, Jang S, Kahles A, Kelly FJ, Knights K, Kyrpides NC, Łabaj PP, Lee PKH, Leung MHY, Ljungdahl PO, Mason-Buck G, McGrath K, Meydan C, Mongodin EF, Moraes MO, Nagarajan N, Nieto-Caballero M, Noushmehr H, Oliveira M, Ossowski S, Osuolale OO, Özcan O, Paez-Espino D, Rascovan N, Richard H, Rätsch G, Schriml LM, Semmler T, Sezerman OU, Shi L, Shi T, Siam R, Song LH, Suzuki H, Court DS, Tighe SW, Tong X, Udekwu KI, Ugalde JA, Valentine B, Vassilev DI, Vayndorf EM, Velavan TP, Wu J, Zambrano MM, Zhu J, Zhu S, Mason CE; International MetaSUB Consortium. Danko D, et al. Among authors: ryon ka. Cell. 2021 Jun 24;184(13):3376-3393.e17. doi: 10.1016/j.cell.2021.05.002. Epub 2021 May 26. Cell. 2021. PMID: 34043940 Free PMC article.
Lessons learned from SARS-CoV-2 measurements in wastewater.
Sharkey ME, Kumar N, Mantero AMA, Babler KM, Boone MM, Cardentey Y, Cortizas EM, Grills GS, Herrin J, Kemper JM, Kenney R, Kobetz E, Laine J, Lamar WE, Mader CC, Mason CE, Quintero AZ, Reding BD, Roca MA, Ryon K, Solle NS, Schürer SC, Shukla B, Stevenson M, Stone T, Tallon JJ Jr, Venkatapuram SS, Vidovic D, Williams SL, Young B, Solo-Gabriele HM. Sharkey ME, et al. Sci Total Environ. 2021 Dec 1;798:149177. doi: 10.1016/j.scitotenv.2021.149177. Epub 2021 Jul 21. Sci Total Environ. 2021. PMID: 34375259 Free PMC article.
Supervised Machine Learning Enables Geospatial Microbial Provenance.
Bhattacharya C, Tierney BT, Ryon KA, Bhattacharyya M, Hastings JJA, Basu S, Bhattacharya B, Bagchi D, Mukherjee S, Wang L, Henaff EM, Mason CE. Bhattacharya C, et al. Among authors: ryon ka. Genes (Basel). 2022 Oct 21;13(10):1914. doi: 10.3390/genes13101914. Genes (Basel). 2022. PMID: 36292799 Free PMC article.
Microbiome and metagenomic analysis of Lake Hillier Australia reveals pigment-rich polyextremophiles and wide-ranging metabolic adaptations.
Sierra MA, Ryon KA, Tierney BT, Foox J, Bhattacharya C, Afshin E, Butler D, Green SJ, Thomas WK, Ramsdell J, Bivens NJ, McGrath K, Mason CE, Tighe SW. Sierra MA, et al. Among authors: ryon ka. Environ Microbiome. 2022 Dec 21;17(1):60. doi: 10.1186/s40793-022-00455-9. Environ Microbiome. 2022. PMID: 36544228 Free PMC article.
Collection of Biospecimens from the Inspiration4 Mission Establishes the Standards for the Space Omics and Medical Atlas (SOMA).
Overbey EG, Ryon K, Kim J, Tierney B, Klotz R, Ortiz V, Mullane S, Schmidt JC, MacKay M, Damle N, Najjar D, Matei I, Patras L, Medina JSG, Kleinman A, Hirschberg JW, Proszynski J, Narayanan SA, Schmidt CM, Afshin EE, Innes L, Saldarriaga MM, Schmidt MA, Granstein RD, Shirah B, Yu M, Lyden D, Mateus J, Mason CE. Overbey EG, et al. bioRxiv [Preprint]. 2023 May 2:2023.05.02.539108. doi: 10.1101/2023.05.02.539108. bioRxiv. 2023. PMID: 37205403 Free PMC article. Preprint.
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