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Streaming histogram sketching for rapid microbiome analytics.
Rowe WP, Carrieri AP, Alcon-Giner C, Caim S, Shaw A, Sim K, Kroll JS, Hall LJ, Pyzer-Knapp EO, Winn MD. Rowe WP, et al. Microbiome. 2019 Mar 16;7(1):40. doi: 10.1186/s40168-019-0653-2. Microbiome. 2019. PMID: 30878035 Free PMC article.
Explainable AI reveals changes in skin microbiome composition linked to phenotypic differences.
Carrieri AP, Haiminen N, Maudsley-Barton S, Gardiner LJ, Murphy B, Mayes AE, Paterson S, Grimshaw S, Winn M, Shand C, Hadjidoukas P, Rowe WPM, Hawkins S, MacGuire-Flanagan A, Tazzioli J, Kenny JG, Parida L, Hoptroff M, Pyzer-Knapp EO. Carrieri AP, et al. Among authors: rowe wpm. Sci Rep. 2021 Feb 25;11(1):4565. doi: 10.1038/s41598-021-83922-6. Sci Rep. 2021. PMID: 33633172 Free PMC article.
An accessible, efficient and global approach for the large-scale sequencing of bacterial genomes.
Perez-Sepulveda BM, Heavens D, Pulford CV, Predeus AV, Low R, Webster H, Dykes GF, Schudoma C, Rowe W, Lipscombe J, Watkins C, Kumwenda B, Shearer N, Costigan K, Baker KS, Feasey NA, Hinton JCD, Hall N; 10KSG consortium. Perez-Sepulveda BM, et al. Genome Biol. 2021 Dec 21;22(1):349. doi: 10.1186/s13059-021-02536-3. Genome Biol. 2021. PMID: 34930397 Free PMC article.
Stepwise evolution of Salmonella Typhimurium ST313 causing bloodstream infection in Africa.
Pulford CV, Perez-Sepulveda BM, Canals R, Bevington JA, Bengtsson RJ, Wenner N, Rodwell EV, Kumwenda B, Zhu X, Bennett RJ, Stenhouse GE, Malaka De Silva P, Webster HJ, Bengoechea JA, Dumigan A, Tran-Dien A, Prakash R, Banda HC, Alufandika L, Mautanga MP, Bowers-Barnard A, Beliavskaia AY, Predeus AV, Rowe WPM, Darby AC, Hall N, Weill FX, Gordon MA, Feasey NA, Baker KS, Hinton JCD. Pulford CV, et al. Among authors: rowe wpm. Nat Microbiol. 2021 Mar;6(3):327-338. doi: 10.1038/s41564-020-00836-1. Epub 2020 Dec 21. Nat Microbiol. 2021. PMID: 33349664 Free PMC article.
The diversity, evolution and ecology of Salmonella in venomous snakes.
Pulford CV, Wenner N, Redway ML, Rodwell EV, Webster HJ, Escudero R, Kröger C, Canals R, Rowe W, Lopez J, Hall N, Rowley PD, Timofte D, Harrison RA, Baker KS, Hinton JCD. Pulford CV, et al. PLoS Negl Trop Dis. 2019 Jun 4;13(6):e0007169. doi: 10.1371/journal.pntd.0007169. eCollection 2019 Jun. PLoS Negl Trop Dis. 2019. PMID: 31163033 Free PMC article.
253 results