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Technology dictates algorithms: recent developments in read alignment.
Alser M, Rotman J, Deshpande D, Taraszka K, Shi H, Baykal PI, Yang HT, Xue V, Knyazev S, Singer BD, Balliu B, Koslicki D, Skums P, Zelikovsky A, Alkan C, Mutlu O, Mangul S. Alser M, et al. Among authors: rotman j. Genome Biol. 2021 Aug 26;22(1):249. doi: 10.1186/s13059-021-02443-7. Genome Biol. 2021. PMID: 34446078 Free PMC article. Review.
Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing.
Mandric I, Rotman J, Yang HT, Strauli N, Montoya DJ, Van Der Wey W, Ronas JR, Statz B, Yao D, Petrova V, Zelikovsky A, Spreafico R, Shifman S, Zaitlen N, Rossetti M, Ansel KM, Eskin E, Mangul S. Mandric I, et al. Among authors: rotman j. Nat Commun. 2020 Jun 19;11(1):3126. doi: 10.1038/s41467-020-16857-7. Nat Commun. 2020. PMID: 32561710 Free PMC article.
Author Correction: Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing.
Mandric I, Rotman J, Yang HT, Strauli N, Montoya DJ, Van Der Wey W, Ronas JR, Statz B, Yao D, Petrova V, Zelikovsky A, Spreafico R, Shifman S, Zaitlen N, Rossetti M, Ansel KM, Eskin E, Mangul S. Mandric I, et al. Among authors: rotman j. Nat Commun. 2020 Sep 4;11(1):4499. doi: 10.1038/s41467-020-18509-2. Nat Commun. 2020. PMID: 32887888 Free PMC article.
RNA-seq data science: From raw data to effective interpretation.
Deshpande D, Chhugani K, Chang Y, Karlsberg A, Loeffler C, Zhang J, Muszyńska A, Munteanu V, Yang H, Rotman J, Tao L, Balliu B, Tseng E, Eskin E, Zhao F, Mohammadi P, P Łabaj P, Mangul S. Deshpande D, et al. Among authors: rotman j. Front Genet. 2023 Mar 13;14:997383. doi: 10.3389/fgene.2023.997383. eCollection 2023. Front Genet. 2023. PMID: 36999049 Free PMC article. Review.
Elder Abuse.
Lee M, Chansakul A, Rotman JA, Rosen A. Lee M, et al. Among authors: rotman ja. Radiol Clin North Am. 2023 Jan;61(1):65-70. doi: 10.1016/j.rcl.2022.08.001. Epub 2022 Oct 7. Radiol Clin North Am. 2023. PMID: 36336392 Review.
Understanding Ballistic Injuries.
Ditkofsky N, Nair JR, Frank Y, Mathur S, Nanda B, Moreland R, Rotman JA. Ditkofsky N, et al. Among authors: rotman ja. Radiol Clin North Am. 2023 Jan;61(1):119-128. doi: 10.1016/j.rcl.2022.08.005. Epub 2022 Oct 20. Radiol Clin North Am. 2023. PMID: 36336385 Review.
59 results