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Page 1
Effective low-cost preservation of human stools in field-based studies for helminth and microbiota analysis.
Stracke K, Adisakwattana P, Phuanukoonnon S, Yoonuan T, Poodeepiyasawat A, Dekumyoy P, Chaisiri K, Roth Schulze A, Wilcox S, Karunajeewa H, Traub RJ, Jex AR. Stracke K, et al. Among authors: roth schulze a. Int J Parasitol. 2021 Aug;51(9):741-748. doi: 10.1016/j.ijpara.2021.01.002. Epub 2021 Mar 26. Int J Parasitol. 2021. PMID: 33774039 Free article.
Influence of fecal collection conditions and 16S rRNA gene sequencing at two centers on human gut microbiota analysis.
Penington JS, Penno MAS, Ngui KM, Ajami NJ, Roth-Schulze AJ, Wilcox SA, Bandala-Sanchez E, Wentworth JM, Barry SC, Brown CY, Couper JJ, Petrosino JF, Papenfuss AT, Harrison LC; ENDIA Study Group*. Penington JS, et al. Among authors: roth schulze aj. Sci Rep. 2018 Mar 12;8(1):4386. doi: 10.1038/s41598-018-22491-7. Sci Rep. 2018. PMID: 29531234 Free PMC article.
Field evaluation of the gut microbiome composition of pre-school and school-aged children in Tha Song Yang, Thailand, following oral MDA for STH infections.
Stracke K, Adisakwattana P, Phuanukoonnon S, Yoonuan T, Poodeepiyasawat A, Dekumyoy P, Chaisiri K, Roth Schulze A, Wilcox S, Karunajeewa H, Traub RJ, Jex AR. Stracke K, et al. Among authors: roth schulze a. PLoS Negl Trop Dis. 2021 Jul 26;15(7):e0009597. doi: 10.1371/journal.pntd.0009597. eCollection 2021 Jul. PLoS Negl Trop Dis. 2021. PMID: 34310596 Free PMC article.
Hierarchical modelling of immunoglobulin coated bacteria in dogs with chronic enteropathy shows reduction in coating with disease remission but marked inter-individual and treatment-response variability.
Martínez-López LM, Perez-Gonzalez A, Washington EA, Woodward AP, Roth-Schulze AJ, Dandrieux JRS, Johnstone T, Prakash N, Jex A, Mansfield C. Martínez-López LM, et al. Among authors: roth schulze aj. PLoS One. 2021 Aug 19;16(8):e0255012. doi: 10.1371/journal.pone.0255012. eCollection 2021. PLoS One. 2021. PMID: 34411114 Free PMC article.
sccomp: Robust differential composition and variability analysis for single-cell data.
Mangiola S, Roth-Schulze AJ, Trussart M, Zozaya-Valdés E, Ma M, Gao Z, Rubin AF, Speed TP, Shim H, Papenfuss AT. Mangiola S, et al. Among authors: roth schulze aj. Proc Natl Acad Sci U S A. 2023 Aug 15;120(33):e2203828120. doi: 10.1073/pnas.2203828120. Epub 2023 Aug 7. Proc Natl Acad Sci U S A. 2023. PMID: 37549298 Free PMC article.
Women with type 1 diabetes exhibit a progressive increase in gut Saccharomyces cerevisiae in pregnancy associated with evidence of gut inflammation.
Bandala-Sanchez E, Roth-Schulze AJ, Oakey H, Penno MAS, Bediaga NG, Naselli G, Ngui KM, Smith AD, Huang D, Zozaya-Valdes E, Thomson RL, Brown JD, Vuillermin PJ, Barry SC, Craig ME, Rawlinson WD, Davis EA, Harris M, Soldatos G, Colman PG, Wentworth JM, Haynes A, Morahan G, Sinnott RO, Papenfuss AT, Couper JJ, Harrison LC; ENDIA Study Group. Bandala-Sanchez E, et al. Among authors: roth schulze aj. Diabetes Res Clin Pract. 2022 Feb;184:109189. doi: 10.1016/j.diabres.2022.109189. Epub 2022 Jan 18. Diabetes Res Clin Pract. 2022. PMID: 35051423 Free article.
Type 1 diabetes in pregnancy is associated with distinct changes in the composition and function of the gut microbiome.
Roth-Schulze AJ, Penno MAS, Ngui KM, Oakey H, Bandala-Sanchez E, Smith AD, Allnutt TR, Thomson RL, Vuillermin PJ, Craig ME, Rawlinson WD, Davis EA, Harris M, Soldatos G, Colman PG, Wentworth JM, Haynes A, Barry SC, Sinnott RO, Morahan G, Bediaga NG, Smyth GK, Papenfuss AT, Couper JJ, Harrison LC; ENDIA Study Group. Roth-Schulze AJ, et al. Microbiome. 2021 Aug 6;9(1):167. doi: 10.1186/s40168-021-01104-y. Microbiome. 2021. PMID: 34362459 Free PMC article.
Gut microbiome dysbiosis and increased intestinal permeability in children with islet autoimmunity and type 1 diabetes: A prospective cohort study.
Harbison JE, Roth-Schulze AJ, Giles LC, Tran CD, Ngui KM, Penno MA, Thomson RL, Wentworth JM, Colman PG, Craig ME, Morahan G, Papenfuss AT, Barry SC, Harrison LC, Couper JJ. Harbison JE, et al. Among authors: roth schulze aj. Pediatr Diabetes. 2019 Aug;20(5):574-583. doi: 10.1111/pedi.12865. Epub 2019 May 20. Pediatr Diabetes. 2019. PMID: 31081243
Associations between diet, the gut microbiome and short chain fatty acids in youth with islet autoimmunity and type 1 diabetes.
Harbison JE, Thomson RL, Wentworth JM, Louise J, Roth-Schulze A, Battersby RJ, Ngui KM, Penno MAS, Colman PG, Craig ME, Barry SC, Tran CD, Makrides M, Harrison LC, Couper JJ. Harbison JE, et al. Among authors: roth schulze a. Pediatr Diabetes. 2021 May;22(3):425-433. doi: 10.1111/pedi.13178. Epub 2021 Feb 1. Pediatr Diabetes. 2021. PMID: 33470492
Expanding the taxonomic range in the fecal metagenome.
Allnutt TR, Roth-Schulze AJ, Harrison LC. Allnutt TR, et al. Among authors: roth schulze aj. BMC Bioinformatics. 2021 Jun 9;22(1):312. doi: 10.1186/s12859-021-04212-6. BMC Bioinformatics. 2021. PMID: 34107881 Free PMC article.
16 results