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Multi-tissue DNA methylation microarray signature is predictive of gene function.
Epigenetics. 2022 Nov;17(11):1404-1418. doi: 10.1080/15592294.2022.2036411. Epub 2022 Feb 13.
Epigenetics. 2022.
PMID: 35152835
Free PMC article.
ALE: automated label extraction from GEO metadata.
Giles CB, Brown CA, Ripperger M, Dennis Z, Roopnarinesingh X, Porter H, Perz A, Wren JD.
Giles CB, et al.
BMC Bioinformatics. 2017 Dec 28;18(Suppl 14):509. doi: 10.1186/s12859-017-1888-1.
BMC Bioinformatics. 2017.
PMID: 29297276
Free PMC article.
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MNEMONIC: MetageNomic Experiment Mining to create an OTU Network of Inhabitant Correlations.
Perz AI, Giles CB, Brown CA, Porter H, Roopnarinesingh X, Wren JD.
Perz AI, et al.
BMC Bioinformatics. 2019 Mar 14;20(Suppl 2):96. doi: 10.1186/s12859-019-2623-x.
BMC Bioinformatics. 2019.
PMID: 30871469
Free PMC article.
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Many chronological aging clocks can be found throughout the epigenome: Implications for quantifying biological aging.
Porter HL, Brown CA, Roopnarinesingh X, Giles CB, Georgescu C, Freeman WM, Wren JD.
Porter HL, et al.
Aging Cell. 2021 Nov;20(11):e13492. doi: 10.1111/acel.13492. Epub 2021 Oct 16.
Aging Cell. 2021.
PMID: 34655509
Free PMC article.
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Hypomethylation of miR-17-92 cluster in lupus T cells and no significant role for genetic factors in the lupus-associated DNA methylation signature.
Coit P, Roopnarinesingh X, Ortiz-Fernández L, McKinnon-Maksimowicz K, Lewis EE, Merrill JT, McCune WJ, Wren JD, Sawalha AH.
Coit P, et al.
Ann Rheum Dis. 2022 Oct;81(10):1428-1437. doi: 10.1136/annrheumdis-2022-222656. Epub 2022 Jun 16.
Ann Rheum Dis. 2022.
PMID: 35710306
Free PMC article.
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