Rokas A - Search Results

1

Examining Signatures of Natural Selection in Antifungal Resistance Genes Across Aspergillus Fungi.

Dos Santos RAC, Mead ME, Steenwyk JL, Rivero-Menéndez O, Alastruey-Izquierdo A, Goldman GH, Rokas A. Dos Santos RAC, et al. Among authors: rokas a. Front Fungal Biol. 2021 Sep 10;2:723051. doi: 10.3389/ffunb.2021.723051. eCollection 2021. Front Fungal Biol. 2021. PMID: 37744093 Free PMC article.

2

Know the enemy and know yourself: Addressing cryptic fungal pathogens of humans and beyond.

Steenwyk JL, Rokas A, Goldman GH. Steenwyk JL, et al. Among authors: rokas a. PLoS Pathog. 2023 Oct 19;19(10):e1011704. doi: 10.1371/journal.ppat.1011704. eCollection 2023 Oct. PLoS Pathog. 2023. PMID: 37856485 Free PMC article. No abstract available.

3

Genomic, transcriptomic, and ecological diversity of Penicillium species in cheese rind microbiomes.

Ye R, Biango-Daniels M, Steenwyk JL, Rokas A, Louw NL, Nardella R, Wolfe BE. Ye R, et al. Among authors: rokas a. Fungal Genet Biol. 2024 Mar;171:103862. doi: 10.1016/j.fgb.2023.103862. Epub 2024 Jan 11. Fungal Genet Biol. 2024. PMID: 38218228

4

Mitochondrial genome diversity across the subphylum Saccharomycotina.

Wolters JF, LaBella AL, Opulente DA, Rokas A, Hittinger CT. Wolters JF, et al. Among authors: rokas a. Front Microbiol. 2023 Nov 23;14:1268944. doi: 10.3389/fmicb.2023.1268944. eCollection 2023. Front Microbiol. 2023. PMID: 38075892 Free PMC article.

5

Extensive intragenomic variation in the internal transcribed spacer region of fungi.

Bradshaw MJ, Aime MC, Rokas A, Maust A, Moparthi S, Jellings K, Pane AM, Hendricks D, Pandey B, Li Y, Pfister DH. Bradshaw MJ, et al. Among authors: rokas a. iScience. 2023 Jul 10;26(8):107317. doi: 10.1016/j.isci.2023.107317. eCollection 2023 Aug 18. iScience. 2023. PMID: 37529098 Free PMC article.

6

A comprehensive map of hotspots of de novo telomere addition in Saccharomyces cerevisiae.

Ngo K, Gittens TH, Gonzalez DI, Hatmaker EA, Plotkin S, Engle M, Friedman GA, Goldin M, Hoerr RE, Eichman BF, Rokas A, Benton ML, Friedman KL. Ngo K, et al. Among authors: rokas a. Genetics. 2023 May 26;224(2):iyad076. doi: 10.1093/genetics/iyad076. Genetics. 2023. PMID: 37119805 Free PMC article.

7

Tracking alternative versions of the galactose gene network in the genus Saccharomyces and their expansion after domestication.

Pontes A, Paraíso F, Liu YC, Limtong S, Jindamorakot S, Jespersen L, Gonçalves C, Rosa CA, Tsai IJ, Rokas A, Hittinger CT, Gonçalves P, Sampaio JP. Pontes A, et al. Among authors: rokas a. iScience. 2024 Jan 23;27(2):108987. doi: 10.1016/j.isci.2024.108987. eCollection 2024 Feb 16. iScience. 2024. PMID: 38333711 Free PMC article.

8

Genome-wide patterns of non-coding and protein-coding sequence variation in the major fungal pathogen Aspergillus fumigatus.

Brown A, Steenwyk JL, Rokas A. Brown A, et al. Among authors: rokas a. G3 (Bethesda). 2024 May 2:jkae091. doi: 10.1093/g3journal/jkae091. Online ahead of print. G3 (Bethesda). 2024. PMID: 38696662

9

Machine learning enables identification of an alternative yeast galactose utilization pathway.

Harrison MC, Ubbelohde EJ, LaBella AL, Opulente DA, Wolters JF, Zhou X, Shen XX, Groenewald M, Hittinger CT, Rokas A. Harrison MC, et al. Among authors: rokas a. Proc Natl Acad Sci U S A. 2024 Apr 30;121(18):e2315314121. doi: 10.1073/pnas.2315314121. Epub 2024 Apr 26. Proc Natl Acad Sci U S A. 2024. PMID: 38669185

10

Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts.

Opulente DA, LaBella AL, Harrison MC, Wolters JF, Liu C, Li Y, Kominek J, Steenwyk JL, Stoneman HR, VanDenAvond J, Miller CR, Langdon QK, Silva M, Gonçalves C, Ubbelohde EJ, Li Y, Buh KV, Jarzyna M, Haase MAB, Rosa CA, ČCadež N, Libkind D, DeVirgilio JH, Hulfachor AB, Kurtzman CP, Sampaio JP, Gonçalves P, Zhou X, Shen XX, Groenewald M, Rokas A, Hittinger CT. Opulente DA, et al. Among authors: rokas a. Science. 2024 Apr 26;384(6694):eadj4503. doi: 10.1126/science.adj4503. Epub 2024 Apr 26. Science. 2024. PMID: 38662846

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