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Diagnostics and correction of batch effects in large-scale proteomic studies: a tutorial.
Čuklina J, Lee CH, Williams EG, Sajic T, Collins BC, Rodríguez Martínez M, Sharma VS, Wendt F, Goetze S, Keele GR, Wollscheid B, Aebersold R, Pedrioli PGA. Čuklina J, et al. Among authors: rodriguez martinez m. Mol Syst Biol. 2021 Aug;17(8):e10240. doi: 10.15252/msb.202110240. Mol Syst Biol. 2021. PMID: 34432947 Free PMC article. Review.
Proteomic-based stratification of intermediate-risk prostate cancer patients.
Zhong Q, Sun R, Aref AT, Noor Z, Anees A, Zhu Y, Lucas N, Poulos RC, Lyu M, Zhu T, Chen GB, Wang Y, Ding X, Rutishauser D, Rupp NJ, Rueschoff JH, Poyet C, Hermanns T, Fankhauser C, Rodríguez Martínez M, Shao W, Buljan M, Neumann JF, Beyer A, Hains PG, Reddel RR, Robinson PJ, Aebersold R, Guo T, Wild PJ. Zhong Q, et al. Among authors: rodriguez martinez m. Life Sci Alliance. 2023 Dec 4;7(2):e202302146. doi: 10.26508/lsa.202302146. Print 2024 Feb. Life Sci Alliance. 2023. PMID: 38052461 Free PMC article.
PIMKL: Pathway-Induced Multiple Kernel Learning.
Manica M, Cadow J, Mathis R, Rodríguez Martínez M. Manica M, et al. Among authors: rodriguez martinez m. NPJ Syst Biol Appl. 2019 Mar 5;5:8. doi: 10.1038/s41540-019-0086-3. eCollection 2019. NPJ Syst Biol Appl. 2019. PMID: 30854223 Free PMC article.
Understanding repertoire sequencing data through a multiscale computational model of the germinal center.
García-Valiente R, Merino Tejero E, Stratigopoulou M, Balashova D, Jongejan A, Lashgari D, Pélissier A, Caniels TG, Claireaux MAF, Musters A, van Gils MJ, Rodríguez Martínez M, de Vries N, Meyer-Hermann M, Guikema JEJ, Hoefsloot H, van Kampen AHC. García-Valiente R, et al. Among authors: rodriguez martinez m. NPJ Syst Biol Appl. 2023 Mar 16;9(1):8. doi: 10.1038/s41540-023-00271-y. NPJ Syst Biol Appl. 2023. PMID: 36927990 Free PMC article.
SysMod: the ISCB community for data-driven computational modelling and multi-scale analysis of biological systems.
Dräger A, Helikar T, Barberis M, Birtwistle M, Calzone L, Chaouiya C, Hasenauer J, Karr JR, Niarakis A, Rodríguez Martínez M, Saez-Rodriguez J, Thakar J. Dräger A, et al. Among authors: rodriguez martinez m. Bioinformatics. 2021 Nov 5;37(21):3702-3706. doi: 10.1093/bioinformatics/btab229. Bioinformatics. 2021. PMID: 34179955 Free PMC article.
158 results