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Page 1
Convergent genomic signatures of domestication in sheep and goats.
Alberto FJ, Boyer F, Orozco-terWengel P, Streeter I, Servin B, de Villemereuil P, Benjelloun B, Librado P, Biscarini F, Colli L, Barbato M, Zamani W, Alberti A, Engelen S, Stella A, Joost S, Ajmone-Marsan P, Negrini R, Orlando L, Rezaei HR, Naderi S, Clarke L, Flicek P, Wincker P, Coissac E, Kijas J, Tosser-Klopp G, Chikhi A, Bruford MW, Taberlet P, Pompanon F. Alberto FJ, et al. Among authors: rezaei hr. Nat Commun. 2018 Mar 6;9(1):813. doi: 10.1038/s41467-018-03206-y. Nat Commun. 2018. PMID: 29511174 Free PMC article.
An evaluation of sequencing coverage and genotyping strategies to assess neutral and adaptive diversity.
Benjelloun B, Boyer F, Streeter I, Zamani W, Engelen S, Alberti A, Alberto FJ, BenBati M, Ibnelbachyr M, Chentouf M, Bechchari A, Rezaei HR, Naderi S, Stella A, Chikhi A, Clarke L, Kijas J, Flicek P, Taberlet P, Pompanon F. Benjelloun B, et al. Among authors: rezaei hr. Mol Ecol Resour. 2019 Nov;19(6):1497-1515. doi: 10.1111/1755-0998.13070. Epub 2019 Sep 9. Mol Ecol Resour. 2019. PMID: 31359622 Free PMC article.
Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds.
Naval-Sanchez M, Nguyen Q, McWilliam S, Porto-Neto LR, Tellam R, Vuocolo T, Reverter A, Perez-Enciso M, Brauning R, Clarke S, McCulloch A, Zamani W, Naderi S, Rezaei HR, Pompanon F, Taberlet P, Worley KC, Gibbs RA, Muzny DM, Jhangiani SN, Cockett N, Daetwyler H, Kijas J. Naval-Sanchez M, et al. Among authors: rezaei hr. Nat Commun. 2018 Feb 28;9(1):859. doi: 10.1038/s41467-017-02809-1. Nat Commun. 2018. PMID: 29491421 Free PMC article.
VarGoats project: a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity.
Denoyelle L, Talouarn E, Bardou P, Colli L, Alberti A, Danchin C, Del Corvo M, Engelen S, Orvain C, Palhière I, Rupp R, Sarry J, Salavati M, Amills M, Clark E, Crepaldi P, Faraut T, Masiga CW, Pompanon F, Rosen BD, Stella A, Van Tassell CP, Tosser-Klopp G; VarGoats Consortium. Denoyelle L, et al. Genet Sel Evol. 2021 Nov 8;53(1):86. doi: 10.1186/s12711-021-00659-6. Genet Sel Evol. 2021. PMID: 34749642 Free PMC article.
Whole mitochondrial genomes unveil the impact of domestication on goat matrilineal variability.
Colli L, Lancioni H, Cardinali I, Olivieri A, Capodiferro MR, Pellecchia M, Rzepus M, Zamani W, Naderi S, Gandini F, Vahidi SM, Agha S, Randi E, Battaglia V, Sardina MT, Portolano B, Rezaei HR, Lymberakis P, Boyer F, Coissac E, Pompanon F, Taberlet P, Ajmone Marsan P, Achilli A. Colli L, et al. Among authors: rezaei hr. BMC Genomics. 2015 Dec 29;16:1115. doi: 10.1186/s12864-015-2342-2. BMC Genomics. 2015. PMID: 26714643 Free PMC article.
Are cattle, sheep, and goats endangered species?
Taberlet P, Valentini A, Rezaei HR, Naderi S, Pompanon F, Negrini R, Ajmone-Marsan P. Taberlet P, et al. Among authors: rezaei hr. Mol Ecol. 2008 Jan;17(1):275-84. doi: 10.1111/j.1365-294X.2007.03475.x. Epub 2007 Oct 8. Mol Ecol. 2008. PMID: 17927711
The goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals.
Naderi S, Rezaei HR, Pompanon F, Blum MG, Negrini R, Naghash HR, Balkiz O, Mashkour M, Gaggiotti OE, Ajmone-Marsan P, Kence A, Vigne JD, Taberlet P. Naderi S, et al. Among authors: rezaei hr. Proc Natl Acad Sci U S A. 2008 Nov 18;105(46):17659-64. doi: 10.1073/pnas.0804782105. Epub 2008 Nov 12. Proc Natl Acad Sci U S A. 2008. PMID: 19004765 Free PMC article.
Broad maternal geographic origin of domestic sheep in Anatolia and the Zagros.
Her C, Rezaei HR, Hughes S, Naderi S, Duffraisse M, Mashkour M, Naghash HR, Bălășescu A, Luikart G, Jordan S, Özüt D, Kence A, Bruford MW, Tresset A, Vigne JD, Taberlet P, Hänni C, Pompanon F. Her C, et al. Among authors: rezaei hr. Anim Genet. 2022 Jun;53(3):452-459. doi: 10.1111/age.13191. Epub 2022 Mar 14. Anim Genet. 2022. PMID: 35288946
Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions.
VarGoats Consortium; Nijman IJ, Rosen BD, Bardou P, Faraut T, Cumer T, Daly KG, Zheng Z, Cai Y, Asadollahpour H, Kul BÇ, Zhang WY, E G, Ayin A, Baird H, Bakhtin M, Bâlteanu VA, Barfield D, Berger B, Blichfeldt T, Boink G, Bugiwati SRA, Cai Z, Carolan S, Clark E, Cubric-Curik V, Dagong MIA, Dorji T, Drew L, Guo J, Hallsson J, Horvat S, Kantanen J, Kawaguchi F, Kazymbet P, Khayatzadeh N, Kim N, Shah MK, Liao Y, Martínez A, Masangkay JS, Masaoka M, Mazza R, McEwan J, Milanesi M, Omar FM, Nomura Y, Ouchene-Khelifi NA, Pereira F, Sahana G, Salavati M, Sasazaki S, Da Silva A, Simčič M, Sölkner J, Sutherland A, Tigchelaar J, Zhang H; Econogene Consortium; Ajmone-Marsan P, Bradley DG, Colli L, Drögemüller C, Jiang Y, Lei C, Mannen H, Pompanon F, Tosser-Klopp G, Lenstra JA. VarGoats Consortium, et al. Mol Ecol. 2022 Aug;31(16):4364-4380. doi: 10.1111/mec.16579. Epub 2022 Jul 12. Mol Ecol. 2022. PMID: 35751552 Free article.
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