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Page 1
The founding charter of the Genomic Observatories Network.
Davies N, Field D, Amaral-Zettler L, Clark MS, Deck J, Drummond A, Faith DP, Geller J, Gilbert J, Glöckner FO, Hirsch PR, Leong JA, Meyer C, Obst M, Planes S, Scholin C, Vogler AP, Gates RD, Toonen R, Berteaux-Lecellier V, Barbier M, Barker K, Bertilsson S, Bicak M, Bietz MJ, Bobe J, Bodrossy L, Borja A, Coddington J, Fuhrman J, Gerdts G, Gillespie R, Goodwin K, Hanson PC, Hero JM, Hoekman D, Jansson J, Jeanthon C, Kao R, Klindworth A, Knight R, Kottmann R, Koo MS, Kotoulas G, Lowe AJ, Marteinsson VT, Meyer F, Morrison N, Myrold DD, Pafilis E, Parker S, Parnell JJ, Polymenakou PN, Ratnasingham S, Roderick GK, Rodriguez-Ezpeleta N, Schonrogge K, Simon N, Valette-Silver NJ, Springer YP, Stone GN, Stones-Havas S, Sansone SA, Thibault KM, Wecker P, Wichels A, Wooley JC, Yahara T, Zingone A; GOs-COS. Davies N, et al. Among authors: ratnasingham s. Gigascience. 2014 Mar 7;3(1):2. doi: 10.1186/2047-217X-3-2. Gigascience. 2014. PMID: 24606731 Free PMC article.
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications.
Yilmaz P, Kottmann R, Field D, Knight R, Cole JR, Amaral-Zettler L, Gilbert JA, Karsch-Mizrachi I, Johnston A, Cochrane G, Vaughan R, Hunter C, Park J, Morrison N, Rocca-Serra P, Sterk P, Arumugam M, Bailey M, Baumgartner L, Birren BW, Blaser MJ, Bonazzi V, Booth T, Bork P, Bushman FD, Buttigieg PL, Chain PS, Charlson E, Costello EK, Huot-Creasy H, Dawyndt P, DeSantis T, Fierer N, Fuhrman JA, Gallery RE, Gevers D, Gibbs RA, San Gil I, Gonzalez A, Gordon JI, Guralnick R, Hankeln W, Highlander S, Hugenholtz P, Jansson J, Kau AL, Kelley ST, Kennedy J, Knights D, Koren O, Kuczynski J, Kyrpides N, Larsen R, Lauber CL, Legg T, Ley RE, Lozupone CA, Ludwig W, Lyons D, Maguire E, Methé BA, Meyer F, Muegge B, Nakielny S, Nelson KE, Nemergut D, Neufeld JD, Newbold LK, Oliver AE, Pace NR, Palanisamy G, Peplies J, Petrosino J, Proctor L, Pruesse E, Quast C, Raes J, Ratnasingham S, Ravel J, Relman DA, Assunta-Sansone S, Schloss PD, Schriml L, Sinha R, Smith MI, Sodergren E, Spo A, Stombaugh J, Tiedje JM, Ward DV, Weinstock GM, Wendel D, White O, Whiteley A, Wilke A, Wortman JR, Yatsunenko T, Glöckner FO. Yilmaz P, et al. Among authors: ratnasingham s. Nat Biotechnol. 2011 May;29(5):415-20. doi: 10.1038/nbt.1823. Nat Biotechnol. 2011. PMID: 21552244 Free PMC article.
Torix Rickettsia are widespread in arthropods and reflect a neglected symbiosis.
Pilgrim J, Thongprem P, Davison HR, Siozios S, Baylis M, Zakharov EV, Ratnasingham S, deWaard JR, Macadam CR, Smith MA, Hurst GDD. Pilgrim J, et al. Among authors: ratnasingham s. Gigascience. 2021 Mar 25;10(3):giab021. doi: 10.1093/gigascience/giab021. Gigascience. 2021. PMID: 33764469 Free PMC article.
Expedited assessment of terrestrial arthropod diversity by coupling Malaise traps with DNA barcoding 1.
deWaard JR, Levesque-Beaudin V, deWaard SL, Ivanova NV, McKeown JTA, Miskie R, Naik S, Perez KHJ, Ratnasingham S, Sobel CN, Sones JE, Steinke C, Telfer AC, Young AD, Young MR, Zakharov EV, Hebert PDN. deWaard JR, et al. Among authors: ratnasingham s. Genome. 2019 Mar;62(3):85-95. doi: 10.1139/gen-2018-0093. Epub 2018 Sep 26. Genome. 2019. PMID: 30257096 Free article.
Metabarcoding a diverse arthropod mock community.
Braukmann TWA, Ivanova NV, Prosser SWJ, Elbrecht V, Steinke D, Ratnasingham S, de Waard JR, Sones JE, Zakharov EV, Hebert PDN. Braukmann TWA, et al. Among authors: ratnasingham s. Mol Ecol Resour. 2019 May;19(3):711-727. doi: 10.1111/1755-0998.13008. Mol Ecol Resour. 2019. PMID: 30779309 Free PMC article.
Counting animal species with DNA barcodes: Canadian insects.
Hebert PD, Ratnasingham S, Zakharov EV, Telfer AC, Levesque-Beaudin V, Milton MA, Pedersen S, Jannetta P, deWaard JR. Hebert PD, et al. Among authors: ratnasingham s. Philos Trans R Soc Lond B Biol Sci. 2016 Sep 5;371(1702):20150333. doi: 10.1098/rstb.2015.0333. Philos Trans R Soc Lond B Biol Sci. 2016. PMID: 27481785 Free PMC article.
A Sequel to Sanger: amplicon sequencing that scales.
Hebert PDN, Braukmann TWA, Prosser SWJ, Ratnasingham S, deWaard JR, Ivanova NV, Janzen DH, Hallwachs W, Naik S, Sones JE, Zakharov EV. Hebert PDN, et al. Among authors: ratnasingham s. BMC Genomics. 2018 Mar 27;19(1):219. doi: 10.1186/s12864-018-4611-3. BMC Genomics. 2018. PMID: 29580219 Free PMC article.
Streamlining the use of BOLD specimen data to record species distributions: a case study with ten Nearctic species of Microgastrinae (Hymenoptera: Braconidae).
Fernandez-Triana JL, Penev L, Ratnasingham S, Smith MA, Sones J, Telfer A, deWaard JR, Hebert PD. Fernandez-Triana JL, et al. Among authors: ratnasingham s. Biodivers Data J. 2014 Oct 29;(2):e4153. doi: 10.3897/BDJ.2.e4153. eCollection 2014. Biodivers Data J. 2014. PMID: 25473326 Free PMC article.
A molecular-based identification resource for the arthropods of Finland.
Roslin T, Somervuo P, Pentinsaari M, Hebert PDN, Agda J, Ahlroth P, Anttonen P, Aspi J, Blagoev G, Blanco S, Chan D, Clayhills T, deWaard J, deWaard S, Elliot T, Elo R, Haapala S, Helve E, Ilmonen J, Hirvonen P, Ho C, Itämies J, Ivanov V, Jakovlev J, Juslén A, Jussila R, Kahanpää J, Kaila L, Jari-PekkaKaitila, Kakko A, Kakko I, Karhu A, Karjalainen S, Kjaerandsen J, Koskinen J, Laasonen EM, Laasonen L, Laine E, Lampila P, Levesque-Beaudin V, Lu L, Lähteenaro M, Majuri P, Malmberg S, Manjunath R, Martikainen P, Mattila J, McKeown J, Metsälä P, Miklasevskaja M, Miller M, Miskie R, Muinonen A, Veli-MattiMukkala, Naik S, Nikolova N, Nupponen K, Ovaskainen O, Österblad I, Paasivirta L, Pajunen T, Parkko P, Paukkunen J, Penttinen R, Perez K, Pohjoismäki J, Prosser S, Raekunnas M, Rahulan M, Rannisto M, Ratnasingham S, Raukko P, Rinne A, Rintala T, Miranda Romo S, Salmela J, Salokannel J, Savolainen R, Schulman L, Sihvonen P, Soliman D, Sones J, Steinke C, Ståhls G, Tabell J, Tiusanen M, Várkonyi G, Vesterinen EJ, Viitanen E, Vikberg V, Viitasaari M, Vilen J, Warne C, Wei C, Winqvist K, Zakharov E, Mutanen M. Roslin T, et al. Among authors: ratnasingham s. Mol Ecol Resour. 2022 Feb;22(2):803-822. doi: 10.1111/1755-0998.13510. Epub 2021 Nov 3. Mol Ecol Resour. 2022. PMID: 34562055 Free article.
52 results