Rangan R - Search Results

1

Kryshtafovych A, Antczak M, Szachniuk M, Zok T, Kretsch RC, Rangan R, Pham P, Das R, Robin X, Studer G, Durairaj J, Eberhardt J, Sweeney A, Topf M, Schwede T, Fidelis K, Moult J. Kryshtafovych A, et al. Among authors: rangan r. Proteins. 2023 Dec;91(12):1550-1557. doi: 10.1002/prot.26515. Epub 2023 Jun 12. Proteins. 2023. PMID: 37306011 Free PMC article.

2

Using Rosetta for RNA homology modeling.

Watkins AM, Rangan R, Das R. Watkins AM, et al. Among authors: rangan r. Methods Enzymol. 2019;623:177-207. doi: 10.1016/bs.mie.2019.05.026. Epub 2019 Jun 11. Methods Enzymol. 2019. PMID: 31239046 Free PMC article.

3

RNA genome conservation and secondary structure in SARS-CoV-2 and SARS-related viruses: a first look.

Rangan R, Zheludev IN, Hagey RJ, Pham EA, Wayment-Steele HK, Glenn JS, Das R. Rangan R, et al. RNA. 2020 Aug;26(8):937-959. doi: 10.1261/rna.076141.120. Epub 2020 May 12. RNA. 2020. PMID: 32398273 Free PMC article.

4

Anomalous Reverse Transcription through Chemical Modifications in Polyadenosine Stretches.

Kladwang W, Topkar VV, Liu B, Rangan R, Hodges TL, Keane SC, Al-Hashimi H, Das R. Kladwang W, et al. Among authors: rangan r. Biochemistry. 2020 Jun 16;59(23):2154-2170. doi: 10.1021/acs.biochem.0c00020. Epub 2020 Jun 1. Biochemistry. 2020. PMID: 32407625 Free PMC article.

5

RNA genome conservation and secondary structure in SARS-CoV-2 and SARS-related viruses.

Rangan R, Zheludev IN, Das R. Rangan R, et al. bioRxiv [Preprint]. 2020 Apr 6:2020.03.27.012906. doi: 10.1101/2020.03.27.012906. bioRxiv. 2020. PMID: 32511306 Free PMC article. Updated. Preprint.

6

FARFAR2: Improved De Novo Rosetta Prediction of Complex Global RNA Folds.

Watkins AM, Rangan R, Das R. Watkins AM, et al. Among authors: rangan r. Structure. 2020 Aug 4;28(8):963-976.e6. doi: 10.1016/j.str.2020.05.011. Epub 2020 Jun 11. Structure. 2020. PMID: 32531203 Free PMC article.

7

De novo 3D models of SARS-CoV-2 RNA elements from consensus experimental secondary structures.

Rangan R, Watkins AM, Chacon J, Kretsch R, Kladwang W, Zheludev IN, Townley J, Rynge M, Thain G, Das R. Rangan R, et al. Nucleic Acids Res. 2021 Apr 6;49(6):3092-3108. doi: 10.1093/nar/gkab119. Nucleic Acids Res. 2021. PMID: 33693814 Free PMC article.

8

Structure of human telomerase holoenzyme with bound telomeric DNA.

Ghanim GE, Fountain AJ, van Roon AM, Rangan R, Das R, Collins K, Nguyen THD. Ghanim GE, et al. Among authors: rangan r. Nature. 2021 May;593(7859):449-453. doi: 10.1038/s41586-021-03415-4. Epub 2021 Apr 21. Nature. 2021. PMID: 33883742 Free PMC article.

9

Geometric deep learning of RNA structure.

Townshend RJL, Eismann S, Watkins AM, Rangan R, Karelina M, Das R, Dror RO. Townshend RJL, et al. Among authors: rangan r. Science. 2021 Aug 27;373(6558):1047-1051. doi: 10.1126/science.abe5650. Science. 2021. PMID: 34446608 Free PMC article.

10

Auto-DRRAFTER: Automated RNA Modeling Based on Cryo-EM Density.

Ma H, Pham P, Luo B, Rangan R, Kappel K, Su Z, Das R. Ma H, et al. Among authors: rangan r. Methods Mol Biol. 2023;2568:193-211. doi: 10.1007/978-1-0716-2687-0_13. Methods Mol Biol. 2023. PMID: 36227570

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