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Discovery of first-in-class nanomolar inhibitors of heptosyltransferase I reveals a new aminoglycoside target and potential alternative mechanism of action.
Sci Rep. 2022 May 4;12(1):7302. doi: 10.1038/s41598-022-10776-x.
Sci Rep. 2022.
PMID: 35508636
Free PMC article.
Ligand-Induced Conformational and Dynamical Changes in a GT-B Glycosyltransferase: Molecular Dynamics Simulations of Heptosyltransferase I Complexes.
Hassan BA, Milicaj J, Ramirez-Mondragon CA, Sham YY, Taylor EA.
Hassan BA, et al. Among authors: ramirez mondragon ca.
J Chem Inf Model. 2022 Jan 24;62(2):324-339. doi: 10.1021/acs.jcim.1c00868. Epub 2021 Dec 30.
J Chem Inf Model. 2022.
PMID: 34967618
Free PMC article.
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Conserved Conformational Hierarchy across Functionally Divergent Glycosyltransferases of the GT-B Structural Superfamily as Determined from Microsecond Molecular Dynamics.
Ramirez-Mondragon CA, Nguyen ME, Milicaj J, Hassan BA, Tucci FJ, Muthyala R, Gao J, Taylor EA, Sham YY.
Ramirez-Mondragon CA, et al.
Int J Mol Sci. 2021 Apr 28;22(9):4619. doi: 10.3390/ijms22094619.
Int J Mol Sci. 2021.
PMID: 33924837
Free PMC article.
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Escherichia coli heptosyltransferase I: investigation of protein dynamics of a GT-B structural enzyme.
Czyzyk DJ, Sawant SS, Ramirez-Mondragon CA, Hingorani MM, Taylor EA.
Czyzyk DJ, et al. Among authors: ramirez mondragon ca.
Biochemistry. 2013 Aug 6;52(31):5158-60. doi: 10.1021/bi400807r. Epub 2013 Jul 23.
Biochemistry. 2013.
PMID: 23865375
Free PMC article.
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The Stories Tryptophans Tell: Exploring Protein Dynamics of Heptosyltransferase I from Escherichia coli.
Cote JM, Ramirez-Mondragon CA, Siegel ZS, Czyzyk DJ, Gao J, Sham YY, Mukerji I, Taylor EA.
Cote JM, et al. Among authors: ramirez mondragon ca.
Biochemistry. 2017 Feb 14;56(6):886-895. doi: 10.1021/acs.biochem.6b00850. Epub 2017 Jan 30.
Biochemistry. 2017.
PMID: 28098447
Free PMC article.
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Opposites Attract: Escherichia coli Heptosyltransferase I Conformational Changes Induced by Interactions between the Substrate and Positively Charged Residues.
Cote JM, Hecht CJS, Patel KR, Ramirez-Mondragon CA, Sham YY, Taylor EA.
Cote JM, et al. Among authors: ramirez mondragon ca.
Biochemistry. 2020 Sep 1;59(34):3135-3147. doi: 10.1021/acs.biochem.9b01005. Epub 2020 Feb 10.
Biochemistry. 2020.
PMID: 32011131
Free PMC article.
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The Class D beta-lactamase family: residues governing the maintenance and diversity of function.
Szarecka A, Lesnock KR, Ramirez-Mondragon CA, Nicholas HB Jr, Wymore T.
Szarecka A, et al. Among authors: ramirez mondragon ca.
Protein Eng Des Sel. 2011 Oct;24(10):801-9. doi: 10.1093/protein/gzr041. Epub 2011 Aug 22.
Protein Eng Des Sel. 2011.
PMID: 21859796
Free PMC article.
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