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Page 1
Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs.
Freedman AH, Schweizer RM, Ortega-Del Vecchyo D, Han E, Davis BW, Gronau I, Silva PM, Galaverni M, Fan Z, Marx P, Lorente-Galdos B, Ramirez O, Hormozdiari F, Alkan C, Vilà C, Squire K, Geffen E, Kusak J, Boyko AR, Parker HG, Lee C, Tadigotla V, Siepel A, Bustamante CD, Harkins TT, Nelson SF, Marques-Bonet T, Ostrander EA, Wayne RK, Novembre J. Freedman AH, et al. Among authors: ramirez o. PLoS Genet. 2016 Mar 4;12(3):e1005851. doi: 10.1371/journal.pgen.1005851. eCollection 2016 Mar. PLoS Genet. 2016. PMID: 26943675 Free PMC article.
Genome sequencing highlights the dynamic early history of dogs.
Freedman AH, Gronau I, Schweizer RM, Ortega-Del Vecchyo D, Han E, Silva PM, Galaverni M, Fan Z, Marx P, Lorente-Galdos B, Beale H, Ramirez O, Hormozdiari F, Alkan C, Vilà C, Squire K, Geffen E, Kusak J, Boyko AR, Parker HG, Lee C, Tadigotla V, Wilton A, Siepel A, Bustamante CD, Harkins TT, Nelson SF, Ostrander EA, Marques-Bonet T, Wayne RK, Novembre J. Freedman AH, et al. Among authors: ramirez o. PLoS Genet. 2014 Jan;10(1):e1004016. doi: 10.1371/journal.pgen.1004016. Epub 2014 Jan 16. PLoS Genet. 2014. PMID: 24453982 Free PMC article.
Worldwide patterns of genomic variation and admixture in gray wolves.
Fan Z, Silva P, Gronau I, Wang S, Armero AS, Schweizer RM, Ramirez O, Pollinger J, Galaverni M, Ortega Del-Vecchyo D, Du L, Zhang W, Zhang Z, Xing J, Vilà C, Marques-Bonet T, Godinho R, Yue B, Wayne RK. Fan Z, et al. Among authors: ramirez o. Genome Res. 2016 Feb;26(2):163-73. doi: 10.1101/gr.197517.115. Epub 2015 Dec 17. Genome Res. 2016. PMID: 26680994 Free PMC article.
Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs.
Marsden CD, Ortega-Del Vecchyo D, O'Brien DP, Taylor JF, Ramirez O, Vilà C, Marques-Bonet T, Schnabel RD, Wayne RK, Lohmueller KE. Marsden CD, et al. Among authors: o brien dp, ramirez o. Proc Natl Acad Sci U S A. 2016 Jan 5;113(1):152-7. doi: 10.1073/pnas.1512501113. Epub 2015 Dec 22. Proc Natl Acad Sci U S A. 2016. PMID: 26699508 Free PMC article.
Similar genomic proportions of copy number variation within gray wolves and modern dog breeds inferred from whole genome sequencing.
Serres-Armero A, Povolotskaya IS, Quilez J, Ramirez O, Santpere G, Kuderna LFK, Hernandez-Rodriguez J, Fernandez-Callejo M, Gomez-Sanchez D, Freedman AH, Fan Z, Novembre J, Navarro A, Boyko A, Wayne R, Vilà C, Lorente-Galdos B, Marques-Bonet T. Serres-Armero A, et al. Among authors: ramirez o. BMC Genomics. 2017 Dec 19;18(1):977. doi: 10.1186/s12864-017-4318-x. BMC Genomics. 2017. PMID: 29258433 Free PMC article.
The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild.
Prado-Martinez J, Hernando-Herraez I, Lorente-Galdos B, Dabad M, Ramirez O, Baeza-Delgado C, Morcillo-Suarez C, Alkan C, Hormozdiari F, Raineri E, Estellé J, Fernandez-Callejo M, Valles M, Ritscher L, Schöneberg T, de la Calle-Mustienes E, Casillas S, Rubio-Acero R, Melé M, Engelken J, Caceres M, Gomez-Skarmeta JL, Gut M, Bertranpetit J, Gut IG, Abello T, Eichler EE, Mingarro I, Lalueza-Fox C, Navarro A, Marques-Bonet T. Prado-Martinez J, et al. Among authors: ramirez o. BMC Genomics. 2013 May 31;14:363. doi: 10.1186/1471-2164-14-363. BMC Genomics. 2013. PMID: 23721540 Free PMC article.
Derived immune and ancestral pigmentation alleles in a 7,000-year-old Mesolithic European.
Olalde I, Allentoft ME, Sánchez-Quinto F, Santpere G, Chiang CW, DeGiorgio M, Prado-Martinez J, Rodríguez JA, Rasmussen S, Quilez J, Ramírez O, Marigorta UM, Fernández-Callejo M, Prada ME, Encinas JM, Nielsen R, Netea MG, Novembre J, Sturm RA, Sabeti P, Marquès-Bonet T, Navarro A, Willerslev E, Lalueza-Fox C. Olalde I, et al. Among authors: ramirez o. Nature. 2014 Mar 13;507(7491):225-8. doi: 10.1038/nature12960. Epub 2014 Jan 26. Nature. 2014. PMID: 24463515 Free PMC article.
Genomic analysis of the blood attributed to Louis XVI (1754-1793), king of France.
Olalde I, Sánchez-Quinto F, Datta D, Marigorta UM, Chiang CW, Rodríguez JA, Fernández-Callejo M, González I, Montfort M, Matas-Lalueza L, Civit S, Luiselli D, Charlier P, Pettener D, Ramírez O, Navarro A, Himmelbauer H, Marquès-Bonet T, Lalueza-Fox C. Olalde I, et al. Among authors: ramirez o. Sci Rep. 2014 Apr 24;4:4666. doi: 10.1038/srep04666. Sci Rep. 2014. PMID: 24763138 Free PMC article.
517 results