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Microbial Transformations of Organically Fermented Foods.
Raghuvanshi R, Grayson AG, Schena I, Amanze O, Suwintono K, Quinn RA. Raghuvanshi R, et al. Among authors: quinn ra. Metabolites. 2019 Aug 10;9(8):165. doi: 10.3390/metabo9080165. Metabolites. 2019. PMID: 31405168 Free PMC article.
High-Resolution Longitudinal Dynamics of the Cystic Fibrosis Sputum Microbiome and Metabolome through Antibiotic Therapy.
Raghuvanshi R, Vasco K, Vázquez-Baeza Y, Jiang L, Morton JT, Li D, Gonzalez A, DeRight Goldasich L, Humphrey G, Ackermann G, Swafford AD, Conrad D, Knight R, Dorrestein PC, Quinn RA. Raghuvanshi R, et al. Among authors: quinn ra. mSystems. 2020 Jun 23;5(3):e00292-20. doi: 10.1128/mSystems.00292-20. mSystems. 2020. PMID: 32576651 Free PMC article.
Metabolomic signatures of coral bleaching history.
Roach TNF, Dilworth J, H CM, Jones AD, Quinn RA, Drury C. Roach TNF, et al. Among authors: quinn ra. Nat Ecol Evol. 2021 Apr;5(4):495-503. doi: 10.1038/s41559-020-01388-7. Epub 2021 Feb 8. Nat Ecol Evol. 2021. PMID: 33558733
Complex and unexpected outcomes of antibiotic therapy against a polymicrobial infection.
Ghuneim LJ, Raghuvanshi R, Neugebauer KA, Guzior DV, Christian MH, Schena B, Feiner JM, Castillo-Bahena A, Mielke J, McClelland M, Conrad D, Klapper I, Zhang T, Quinn RA. Ghuneim LJ, et al. Among authors: quinn ra. ISME J. 2022 Sep;16(9):2065-2075. doi: 10.1038/s41396-022-01252-5. Epub 2022 May 21. ISME J. 2022. PMID: 35597889 Free PMC article.
Longitudinal effects of growth restriction on the murine gut microbiome and metabolome.
Quinn MA, Pritchard AE, Visker JR, McPeek AC, Raghuvanshi R, Martin H C, Wellette-Hunsucker AG, Leszczynski EC, McCabe LR, Pfeiffer KA, Quinn RA, Ferguson DP. Quinn MA, et al. Among authors: quinn ra. Am J Physiol Endocrinol Metab. 2022 Aug 1;323(2):E159-E170. doi: 10.1152/ajpendo.00446.2021. Epub 2022 Jun 6. Am J Physiol Endocrinol Metab. 2022. PMID: 35658543 Free PMC article.
ReDU: a framework to find and reanalyze public mass spectrometry data.
Jarmusch AK, Wang M, Aceves CM, Advani RS, Aguirre S, Aksenov AA, Aleti G, Aron AT, Bauermeister A, Bolleddu S, Bouslimani A, Caraballo Rodriguez AM, Chaar R, Coras R, Elijah EO, Ernst M, Gauglitz JM, Gentry EC, Husband M, Jarmusch SA, Jones KL 2nd, Kamenik Z, Le Gouellec A, Lu A, McCall LI, McPhail KL, Meehan MJ, Melnik AV, Menezes RC, Montoya Giraldo YA, Nguyen NH, Nothias LF, Nothias-Esposito M, Panitchpakdi M, Petras D, Quinn RA, Sikora N, van der Hooft JJJ, Vargas F, Vrbanac A, Weldon KC, Knight R, Bandeira N, Dorrestein PC. Jarmusch AK, et al. Among authors: quinn ra. Nat Methods. 2020 Sep;17(9):901-904. doi: 10.1038/s41592-020-0916-7. Epub 2020 Aug 17. Nat Methods. 2020. PMID: 32807955 Free PMC article.
Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data.
Aksenov AA, Laponogov I, Zhang Z, Doran SLF, Belluomo I, Veselkov D, Bittremieux W, Nothias LF, Nothias-Esposito M, Maloney KN, Misra BB, Melnik AV, Smirnov A, Du X, Jones KL 2nd, Dorrestein K, Panitchpakdi M, Ernst M, van der Hooft JJJ, Gonzalez M, Carazzone C, Amézquita A, Callewaert C, Morton JT, Quinn RA, Bouslimani A, Orio AA, Petras D, Smania AM, Couvillion SP, Burnet MC, Nicora CD, Zink E, Metz TO, Artaev V, Humston-Fulmer E, Gregor R, Meijler MM, Mizrahi I, Eyal S, Anderson B, Dutton R, Lugan R, Boulch PL, Guitton Y, Prevost S, Poirier A, Dervilly G, Le Bizec B, Fait A, Persi NS, Song C, Gashu K, Coras R, Guma M, Manasson J, Scher JU, Barupal DK, Alseekh S, Fernie AR, Mirnezami R, Vasiliou V, Schmid R, Borisov RS, Kulikova LN, Knight R, Wang M, Hanna GB, Dorrestein PC, Veselkov K. Aksenov AA, et al. Among authors: quinn ra. Nat Biotechnol. 2021 Feb;39(2):169-173. doi: 10.1038/s41587-020-0700-3. Epub 2020 Nov 9. Nat Biotechnol. 2021. PMID: 33169034 Free PMC article.
85 results