Pushkarev A - Search Results

1

Shihoya W, Inoue K, Singh M, Konno M, Hososhima S, Yamashita K, Ikeda K, Higuchi A, Izume T, Okazaki S, Hashimoto M, Mizutori R, Tomida S, Yamauchi Y, Abe-Yoshizumi R, Katayama K, Tsunoda SP, Shibata M, Furutani Y, Pushkarev A, Béjà O, Uchihashi T, Kandori H, Nureki O. Shihoya W, et al. Among authors: pushkarev a. Nature. 2019 Oct;574(7776):132-136. doi: 10.1038/s41586-019-1604-6. Epub 2019 Sep 25. Nature. 2019. PMID: 31554965

2

Functional metagenomic screen reveals new and diverse microbial rhodopsins.

Pushkarev A, Béjà O. Pushkarev A, et al. ISME J. 2016 Sep;10(9):2331-5. doi: 10.1038/ismej.2016.7. Epub 2016 Feb 19. ISME J. 2016. PMID: 26894445 Free PMC article.

3

The Use of a Chimeric Rhodopsin Vector for the Detection of New Proteorhodopsins Based on Color.

Pushkarev A, Hevroni G, Roitman S, Shim JG, Choi A, Jung KH, Béjà O. Pushkarev A, et al. Front Microbiol. 2018 Mar 13;9:439. doi: 10.3389/fmicb.2018.00439. eCollection 2018. Front Microbiol. 2018. PMID: 29593685 Free PMC article.

4

A distinct abundant group of microbial rhodopsins discovered using functional metagenomics.

Pushkarev A, Inoue K, Larom S, Flores-Uribe J, Singh M, Konno M, Tomida S, Ito S, Nakamura R, Tsunoda SP, Philosof A, Sharon I, Yutin N, Koonin EV, Kandori H, Béjà O. Pushkarev A, et al. Nature. 2018 Jun;558(7711):595-599. doi: 10.1038/s41586-018-0225-9. Epub 2018 Jun 20. Nature. 2018. PMID: 29925949

5

Mutation Study of Heliorhodopsin 48C12.

Singh M, Inoue K, Pushkarev A, Béjà O, Kandori H. Singh M, et al. Among authors: pushkarev a. Biochemistry. 2018 Aug 21;57(33):5041-5049. doi: 10.1021/acs.biochem.8b00637. Epub 2018 Aug 6. Biochemistry. 2018. PMID: 30036039

6

Heliorhodopsins are absent in diderm (Gram-negative) bacteria: Some thoughts and possible implications for activity.

Flores-Uribe J, Hevroni G, Ghai R, Pushkarev A, Inoue K, Kandori H, Béjà O. Flores-Uribe J, et al. Among authors: pushkarev a. Environ Microbiol Rep. 2019 Jun;11(3):419-424. doi: 10.1111/1758-2229.12730. Epub 2019 Jan 21. Environ Microbiol Rep. 2019. PMID: 30618066

7

Light-Induced Conformational Alterations in Heliorhodopsin Triggered by the Retinal Excited State.

Das I, Pushkarev A, Sheves M. Das I, et al. Among authors: pushkarev a. J Phys Chem B. 2021 Aug 12;125(31):8797-8804. doi: 10.1021/acs.jpcb.1c04551. Epub 2021 Aug 3. J Phys Chem B. 2021. PMID: 34342994 Free PMC article.

8

Diverse heliorhodopsins detected via functional metagenomics in freshwater Actinobacteria, Chloroflexi and Archaea.

Chazan A, Rozenberg A, Mannen K, Nagata T, Tahan R, Yaish S, Larom S, Inoue K, Béjà O, Pushkarev A. Chazan A, et al. Among authors: pushkarev a. Environ Microbiol. 2022 Jan;24(1):110-121. doi: 10.1111/1462-2920.15890. Epub 2022 Jan 4. Environ Microbiol. 2022. PMID: 34984789

9

Searching Metagenomes for New Rhodopsins.

Rodriguez-Valera F, Pushkarev A, Rosselli R, Béjà O. Rodriguez-Valera F, et al. Among authors: pushkarev a. Methods Mol Biol. 2022;2501:101-108. doi: 10.1007/978-1-0716-2329-9_4. Methods Mol Biol. 2022. PMID: 35857224

10

Proton-transporting heliorhodopsins from marine giant viruses.

Hososhima S, Mizutori R, Abe-Yoshizumi R, Rozenberg A, Shigemura S, Pushkarev A, Konno M, Katayama K, Inoue K, Tsunoda SP, Béjà O, Kandori H. Hososhima S, et al. Among authors: pushkarev a. Elife. 2022 Sep 6;11:e78416. doi: 10.7554/eLife.78416. Elife. 2022. PMID: 36065640 Free PMC article.

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