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Genome-Scale Modeling of Thermophilic Microorganisms.
Dahal S, Poudel S, Thompson RA. Dahal S, et al. Among authors: poudel s. Adv Biochem Eng Biotechnol. 2017;160:103-119. doi: 10.1007/10_2016_45. Adv Biochem Eng Biotechnol. 2017. PMID: 27913830 Review.
Insights from 20 years of bacterial genome sequencing.
Land M, Hauser L, Jun SR, Nookaew I, Leuze MR, Ahn TH, Karpinets T, Lund O, Kora G, Wassenaar T, Poudel S, Ussery DW. Land M, et al. Among authors: poudel s. Funct Integr Genomics. 2015 Mar;15(2):141-61. doi: 10.1007/s10142-015-0433-4. Epub 2015 Feb 27. Funct Integr Genomics. 2015. PMID: 25722247 Free PMC article. Review.
Integrated omics analyses reveal the details of metabolic adaptation of Clostridium thermocellum to lignocellulose-derived growth inhibitors released during the deconstruction of switchgrass.
Poudel S, Giannone RJ, Rodriguez M Jr, Raman B, Martin MZ, Engle NL, Mielenz JR, Nookaew I, Brown SD, Tschaplinski TJ, Ussery D, Hettich RL. Poudel S, et al. Biotechnol Biofuels. 2017 Jan 10;10:14. doi: 10.1186/s13068-016-0697-5. eCollection 2017. Biotechnol Biofuels. 2017. PMID: 28077967 Free PMC article.
Functional Analysis of the Glucan Degradation Locus in Caldicellulosiruptor bescii Reveals Essential Roles of Component Glycoside Hydrolases in Plant Biomass Deconstruction.
Conway JM, McKinley BS, Seals NL, Hernandez D, Khatibi PA, Poudel S, Giannone RJ, Hettich RL, Williams-Rhaesa AM, Lipscomb GL, Adams MWW, Kelly RM. Conway JM, et al. Among authors: poudel s. Appl Environ Microbiol. 2017 Dec 1;83(24):e01828-17. doi: 10.1128/AEM.01828-17. Print 2017 Dec 15. Appl Environ Microbiol. 2017. PMID: 28986379 Free PMC article.
Integrated Proteomics and Lipidomics Reveal That the Swarming Motility of Paenibacillus polymyxa Is Characterized by Phospholipid Modification, Surfactant Deployment, and Flagellar Specialization Relative to Swimming Motility.
Poudel S, Giannone RJ, Farmer AT, Campagna SR, Bible AN, Morrell-Falvey JL, Elkins JG, Hettich RL. Poudel S, et al. Front Microbiol. 2019 Nov 19;10:2594. doi: 10.3389/fmicb.2019.02594. eCollection 2019. Front Microbiol. 2019. PMID: 31798553 Free PMC article.
Outer membrane vesicles catabolize lignin-derived aromatic compounds in Pseudomonas putida KT2440.
Salvachúa D, Werner AZ, Pardo I, Michalska M, Black BA, Donohoe BS, Haugen SJ, Katahira R, Notonier S, Ramirez KJ, Amore A, Purvine SO, Zink EM, Abraham PE, Giannone RJ, Poudel S, Laible PD, Hettich RL, Beckham GT. Salvachúa D, et al. Among authors: poudel s. Proc Natl Acad Sci U S A. 2020 Apr 28;117(17):9302-9310. doi: 10.1073/pnas.1921073117. Epub 2020 Apr 3. Proc Natl Acad Sci U S A. 2020. PMID: 32245809 Free PMC article.
396 results