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A conserved quality-control pathway that mediates degradation of unassembled ribosomal proteins.
Elife. 2016 Aug 23;5:e19105. doi: 10.7554/eLife.19105.
Elife. 2016.
PMID: 27552055
Free PMC article.
Recent advances in defining the ubiquitylome.
Porras-Yakushi TR, Hess S.
Porras-Yakushi TR, et al.
Expert Rev Proteomics. 2014 Aug;11(4):477-90. doi: 10.1586/14789450.2014.926223. Epub 2014 Jun 25.
Expert Rev Proteomics. 2014.
PMID: 24961939
Review.
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In-depth proteomic analysis of proteasome inhibitors bortezomib, carfilzomib and MG132 reveals that mortality factor 4-like 1 (MORF4L1) protein ubiquitylation is negatively impacted.
Porras-Yakushi TR, Reitsma JM, Sweredoski MJ, Deshaies RJ, Hess S.
Porras-Yakushi TR, et al.
J Proteomics. 2021 Jun 15;241:104197. doi: 10.1016/j.jprot.2021.104197. Epub 2021 Apr 10.
J Proteomics. 2021.
PMID: 33848640
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ETD Outperforms CID and HCD in the Analysis of the Ubiquitylated Proteome.
Porras-Yakushi TR, Sweredoski MJ, Hess S.
Porras-Yakushi TR, et al.
J Am Soc Mass Spectrom. 2015 Sep;26(9):1580-7. doi: 10.1007/s13361-015-1168-0. Epub 2015 May 21.
J Am Soc Mass Spectrom. 2015.
PMID: 25994767
Free PMC article.
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A Targeted MRM Approach for Tempo-Spatial Proteomics Analyses.
Moradian A, Porras-Yakushi TR, Sweredoski MJ, Hess S.
Moradian A, et al. Among authors: porras yakushi tr.
Methods Mol Biol. 2016;1394:75-85. doi: 10.1007/978-1-4939-3341-9_6.
Methods Mol Biol. 2016.
PMID: 26700042
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A novel SET domain methyltransferase in yeast: Rkm2-dependent trimethylation of ribosomal protein L12ab at lysine 10.
Porras-Yakushi TR, Whitelegge JP, Clarke S.
Porras-Yakushi TR, et al.
J Biol Chem. 2006 Nov 24;281(47):35835-45. doi: 10.1074/jbc.M606578200. Epub 2006 Sep 27.
J Biol Chem. 2006.
PMID: 17005568
Free article.
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A novel SET domain methyltransferase modifies ribosomal protein Rpl23ab in yeast.
Porras-Yakushi TR, Whitelegge JP, Miranda TB, Clarke S.
Porras-Yakushi TR, et al.
J Biol Chem. 2005 Oct 14;280(41):34590-8. doi: 10.1074/jbc.M507672200. Epub 2005 Aug 11.
J Biol Chem. 2005.
PMID: 16096273
Free article.
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Yeast ribosomal/cytochrome c SET domain methyltransferase subfamily: identification of Rpl23ab methylation sites and recognition motifs.
Porras-Yakushi TR, Whitelegge JP, Clarke S.
Porras-Yakushi TR, et al.
J Biol Chem. 2007 Apr 27;282(17):12368-76. doi: 10.1074/jbc.M611896200. Epub 2007 Feb 26.
J Biol Chem. 2007.
PMID: 17327221
Free article.
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