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Protocol for structure determination of SARS-CoV-2 main protease at near-physiological-temperature by serial femtosecond crystallography.
Ertem FB, Guven O, Buyukdag C, Gocenler O, Ayan E, Yuksel B, Gul M, Usta G, Cakılkaya B, Johnson JA, Dao EH, Su Z, Poitevin F, Yoon CH, Kupitz C, Hayes B, Liang M, Hunter MS, Batyuk A, Sierra RG, Ketawala G, Botha S, Dağ Ç, DeMirci H. Ertem FB, et al. Among authors: poitevin f. STAR Protoc. 2022 Jan 24;3(1):101158. doi: 10.1016/j.xpro.2022.101158. eCollection 2022 Mar 18. STAR Protoc. 2022. PMID: 35194584 Free PMC article.
Aminoglycoside ribosome interactions reveal novel conformational states at ambient temperature.
O'Sullivan ME, Poitevin F, Sierra RG, Gati C, Dao EH, Rao Y, Aksit F, Ciftci H, Corsepius N, Greenhouse R, Hayes B, Hunter MS, Liang M, McGurk A, Mbgam P, Obrinsky T, Pardo-Avila F, Seaberg MH, Cheng AG, Ricci AJ, DeMirci H. O'Sullivan ME, et al. Among authors: poitevin f. Nucleic Acids Res. 2018 Oct 12;46(18):9793-9804. doi: 10.1093/nar/gky693. Nucleic Acids Res. 2018. PMID: 30113694 Free PMC article.
Structure of the 30S ribosomal decoding complex at ambient temperature.
Dao EH, Poitevin F, Sierra RG, Gati C, Rao Y, Ciftci HI, Akşit F, McGurk A, Obrinski T, Mgbam P, Hayes B, De Lichtenberg C, Pardo-Avila F, Corsepius N, Zhang L, Seaberg MH, Hunter MS, Liang M, Koglin JE, Wakatsuki S, Demirci H. Dao EH, et al. Among authors: poitevin f. RNA. 2018 Dec;24(12):1667-1676. doi: 10.1261/rna.067660.118. Epub 2018 Aug 23. RNA. 2018. PMID: 30139800 Free PMC article.
Near-physiological-temperature serial crystallography reveals conformations of SARS-CoV-2 main protease active site for improved drug repurposing.
Durdagi S, Dağ Ç, Dogan B, Yigin M, Avsar T, Buyukdag C, Erol I, Ertem FB, Calis S, Yildirim G, Orhan MD, Guven O, Aksoydan B, Destan E, Sahin K, Besler SO, Oktay L, Shafiei A, Tolu I, Ayan E, Yuksel B, Peksen AB, Gocenler O, Yucel AD, Can O, Ozabrahamyan S, Olkan A, Erdemoglu E, Aksit F, Tanisali G, Yefanov OM, Barty A, Tolstikova A, Ketawala GK, Botha S, Dao EH, Hayes B, Liang M, Seaberg MH, Hunter MS, Batyuk A, Mariani V, Su Z, Poitevin F, Yoon CH, Kupitz C, Sierra RG, Snell EH, DeMirci H. Durdagi S, et al. Among authors: poitevin f. Structure. 2021 Dec 2;29(12):1382-1396.e6. doi: 10.1016/j.str.2021.07.007. Epub 2021 Aug 16. Structure. 2021. PMID: 34403647 Free PMC article.
Chemical crystallography by serial femtosecond X-ray diffraction.
Schriber EA, Paley DW, Bolotovsky R, Rosenberg DJ, Sierra RG, Aquila A, Mendez D, Poitevin F, Blaschke JP, Bhowmick A, Kelly RP, Hunter M, Hayes B, Popple DC, Yeung M, Pareja-Rivera C, Lisova S, Tono K, Sugahara M, Owada S, Kuykendall T, Yao K, Schuck PJ, Solis-Ibarra D, Sauter NK, Brewster AS, Hohman JN. Schriber EA, et al. Among authors: poitevin f. Nature. 2022 Jan;601(7893):360-365. doi: 10.1038/s41586-021-04218-3. Epub 2022 Jan 19. Nature. 2022. PMID: 35046599 Free PMC article.
Cooperative allostery and structural dynamics of streptavidin at cryogenic- and ambient-temperature.
Ayan E, Yuksel B, Destan E, Ertem FB, Yildirim G, Eren M, Yefanov OM, Barty A, Tolstikova A, Ketawala GK, Botha S, Dao EH, Hayes B, Liang M, Seaberg MH, Hunter MS, Batyuk A, Mariani V, Su Z, Poitevin F, Yoon CH, Kupitz C, Cohen A, Doukov T, Sierra RG, Dağ Ç, DeMirci H. Ayan E, et al. Among authors: poitevin f. Commun Biol. 2022 Jan 20;5(1):73. doi: 10.1038/s42003-021-02903-7. Commun Biol. 2022. PMID: 35058563 Free PMC article.
Skopi: a simulation package for diffractive imaging of noncrystalline biomolecules.
Peck A, Chang HY, Dujardin A, Ramalingam D, Uervirojnangkoorn M, Wang Z, Mancuso A, Poitevin F, Yoon CH. Peck A, et al. Among authors: poitevin f. J Appl Crystallogr. 2022 Jul 15;55(Pt 4):1002-1010. doi: 10.1107/S1600576722005994. eCollection 2022 Aug 1. J Appl Crystallogr. 2022. PMID: 35974743 Free PMC article.
RNA structures and dynamics with Å resolution revealed by x-ray free-electron lasers.
Zielinski KA, Sui S, Pabit SA, Rivera DA, Wang T, Hu Q, Kashipathy MM, Lisova S, Schaffer CB, Mariani V, Hunter MS, Kupitz C, Moss FR 3rd, Poitevin FP, Grant TD, Pollack L. Zielinski KA, et al. Among authors: poitevin fp. Sci Adv. 2023 Sep 29;9(39):eadj3509. doi: 10.1126/sciadv.adj3509. Epub 2023 Sep 27. Sci Adv. 2023. PMID: 37756398 Free PMC article.
Changes in an enzyme ensemble during catalysis observed by high-resolution XFEL crystallography.
Smith N, Dasgupta M, Wych DC, Dolamore C, Sierra RG, Lisova S, Marchany-Rivera D, Cohen AE, Boutet S, Hunter MS, Kupitz C, Poitevin F, Moss FR 3rd, Mittan-Moreau DW, Brewster AS, Sauter NK, Young ID, Wolff AM, Tiwari VK, Kumar N, Berkowitz DB, Hadt RG, Thompson MC, Follmer AH, Wall ME, Wilson MA. Smith N, et al. Among authors: poitevin f. Sci Adv. 2024 Mar 29;10(13):eadk7201. doi: 10.1126/sciadv.adk7201. Epub 2024 Mar 27. Sci Adv. 2024. PMID: 38536910 Free PMC article.
68 results