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Semantic text mining in early drug discovery for type 2 diabetes.
PLoS One. 2020 Jun 15;15(6):e0233956. doi: 10.1371/journal.pone.0233956. eCollection 2020.
PLoS One. 2020.
PMID: 32542027
Free PMC article.
DISEASES: text mining and data integration of disease-gene associations.
Pletscher-Frankild S, Pallejà A, Tsafou K, Binder JX, Jensen LJ.
Pletscher-Frankild S, et al.
Methods. 2015 Mar;74:83-9. doi: 10.1016/j.ymeth.2014.11.020. Epub 2014 Dec 5.
Methods. 2015.
PMID: 25484339
Free article.
Item in Clipboard
Protein-driven inference of miRNA-disease associations.
Mørk S, Pletscher-Frankild S, Palleja Caro A, Gorodkin J, Jensen LJ.
Mørk S, et al. Among authors: pletscher frankild s.
Bioinformatics. 2014 Feb 1;30(3):392-7. doi: 10.1093/bioinformatics/btt677. Epub 2013 Nov 21.
Bioinformatics. 2014.
PMID: 24273243
Free PMC article.
Item in Clipboard
STITCH 4: integration of protein-chemical interactions with user data.
Kuhn M, Szklarczyk D, Pletscher-Frankild S, Blicher TH, von Mering C, Jensen LJ, Bork P.
Kuhn M, et al. Among authors: pletscher frankild s.
Nucleic Acids Res. 2014 Jan;42(Database issue):D401-7. doi: 10.1093/nar/gkt1207. Epub 2013 Nov 28.
Nucleic Acids Res. 2014.
PMID: 24293645
Free PMC article.
Item in Clipboard
COMPARTMENTS: unification and visualization of protein subcellular localization evidence.
Binder JX, Pletscher-Frankild S, Tsafou K, Stolte C, O'Donoghue SI, Schneider R, Jensen LJ.
Binder JX, et al. Among authors: pletscher frankild s.
Database (Oxford). 2014 Feb 25;2014:bau012. doi: 10.1093/database/bau012. Print 2014.
Database (Oxford). 2014.
PMID: 24573882
Free PMC article.
Item in Clipboard
Comprehensive comparison of large-scale tissue expression datasets.
Santos A, Tsafou K, Stolte C, Pletscher-Frankild S, O'Donoghue SI, Jensen LJ.
Santos A, et al. Among authors: pletscher frankild s.
PeerJ. 2015 Jun 30;3:e1054. doi: 10.7717/peerj.1054. eCollection 2015.
PeerJ. 2015.
PMID: 26157623
Free PMC article.
Item in Clipboard
Mass spectrometry of human leukocyte antigen class I peptidomes reveals strong effects of protein abundance and turnover on antigen presentation.
Bassani-Sternberg M, Pletscher-Frankild S, Jensen LJ, Mann M.
Bassani-Sternberg M, et al. Among authors: pletscher frankild s.
Mol Cell Proteomics. 2015 Mar;14(3):658-73. doi: 10.1074/mcp.M114.042812. Epub 2015 Jan 9.
Mol Cell Proteomics. 2015.
PMID: 25576301
Free PMC article.
Item in Clipboard
Design, implementation, and operation of a rapid, robust named entity recognition web service.
Pletscher-Frankild S, Jensen LJ.
Pletscher-Frankild S, et al.
J Cheminform. 2019 Mar 8;11(1):19. doi: 10.1186/s13321-019-0344-9.
J Cheminform. 2019.
PMID: 30850898
Free PMC article.
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