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Clustering high throughput biological data with B-MST, a minimum spanning tree based heuristic.
Comput Biol Med. 2015 Jul;62:94-102. doi: 10.1016/j.compbiomed.2015.03.031. Epub 2015 Apr 14.
Comput Biol Med. 2015.
PMID: 25912991
Clustering of High Throughput Gene Expression Data.
Pirim H, Ekşioğlu B, Perkins A, Yüceer C.
Pirim H, et al.
Comput Oper Res. 2012 Dec;39(12):3046-3061. doi: 10.1016/j.cor.2012.03.008.
Comput Oper Res. 2012.
PMID: 23144527
Free PMC article.
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Gene Coexpression Network Comparison via Persistent Homology.
Duman AN, Pirim H.
Duman AN, et al. Among authors: pirim h.
Int J Genomics. 2018 Sep 19;2018:7329576. doi: 10.1155/2018/7329576. eCollection 2018.
Int J Genomics. 2018.
PMID: 30327773
Free PMC article.
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Uncovering Dynamic Brain Reconfiguration in MEG Working Memory n-Back Task Using Topological Data Analysis.
Duman AN, Tatar AE, Pirim H.
Duman AN, et al. Among authors: pirim h.
Brain Sci. 2019 Jun 19;9(6):144. doi: 10.3390/brainsci9060144.
Brain Sci. 2019.
PMID: 31248185
Free PMC article.
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Integrated twitter analysis to distinguish systems thinkers at various levels: a case study of COVID-19.
Pirim H, Nagahi M, Larif O, Nagahisarchoghaei M, Jaradat R.
Pirim H, et al.
Appl Netw Sci. 2023;8(1):12. doi: 10.1007/s41109-022-00520-9. Epub 2023 Feb 17.
Appl Netw Sci. 2023.
PMID: 36846025
Free PMC article.
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