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SNP genotyping allows an in-depth characterisation of the genome of sugarcane and other complex autopolyploids.
Garcia AA, Mollinari M, Marconi TG, Serang OR, Silva RR, Vieira ML, Vicentini R, Costa EA, Mancini MC, Garcia MO, Pastina MM, Gazaffi R, Martins ER, Dahmer N, Sforça DA, Silva CB, Bundock P, Henry RJ, Souza GM, van Sluys MA, Landell MG, Carneiro MS, Vincentz MA, Pinto LR, Vencovsky R, Souza AP. Garcia AA, et al. Among authors: pinto lr. Sci Rep. 2013 Dec 2;3:3399. doi: 10.1038/srep03399. Sci Rep. 2013. PMID: 24292365 Free PMC article.
Development of an integrated genetic map of a sugarcane (Saccharum spp.) commercial cross, based on a maximum-likelihood approach for estimation of linkage and linkage phases.
Garcia AA, Kido EA, Meza AN, Souza HM, Pinto LR, Pastina MM, Leite CS, Silva JA, Ulian EC, Figueira A, Souza AP. Garcia AA, et al. Among authors: pinto lr. Theor Appl Genet. 2006 Jan;112(2):298-314. doi: 10.1007/s00122-005-0129-6. Epub 2005 Nov 24. Theor Appl Genet. 2006. PMID: 16307229
Characterization of new polymorphic functional markers for sugarcane.
Oliveira KM, Pinto LR, Marconi TG, Mollinari M, Ulian EC, Chabregas SM, Falco MC, Burnquist W, Garcia AA, Souza AP. Oliveira KM, et al. Among authors: pinto lr. Genome. 2009 Feb;52(2):191-209. doi: 10.1139/g08-105. Genome. 2009. PMID: 19234567
Functional markers for gene mapping and genetic diversity studies in sugarcane.
Marconi TG, Costa EA, Miranda HR, Mancini MC, Cardoso-Silva CB, Oliveira KM, Pinto LR, Mollinari M, Garcia AA, Souza AP. Marconi TG, et al. Among authors: pinto lr. BMC Res Notes. 2011 Jul 28;4:264. doi: 10.1186/1756-0500-4-264. BMC Res Notes. 2011. PMID: 21798036 Free PMC article.
A mixed model QTL analysis for sugarcane multiple-harvest-location trial data.
Pastina MM, Malosetti M, Gazaffi R, Mollinari M, Margarido GR, Oliveira KM, Pinto LR, Souza AP, van Eeuwijk FA, Garcia AA. Pastina MM, et al. Among authors: pinto lr. Theor Appl Genet. 2012 Mar;124(5):835-49. doi: 10.1007/s00122-011-1748-8. Epub 2011 Dec 13. Theor Appl Genet. 2012. PMID: 22159754 Free PMC article.
De novo assembly and transcriptome analysis of contrasting sugarcane varieties.
Cardoso-Silva CB, Costa EA, Mancini MC, Balsalobre TW, Canesin LE, Pinto LR, Carneiro MS, Garcia AA, de Souza AP, Vicentini R. Cardoso-Silva CB, et al. Among authors: pinto lr. PLoS One. 2014 Feb 11;9(2):e88462. doi: 10.1371/journal.pone.0088462. eCollection 2014. PLoS One. 2014. PMID: 24523899 Free PMC article.
Gene Duplication in the Sugarcane Genome: A Case Study of Allele Interactions and Evolutionary Patterns in Two Genic Regions.
Sforça DA, Vautrin S, Cardoso-Silva CB, Mancini MC, Romero-da Cruz MV, Pereira GDS, Conte M, Bellec A, Dahmer N, Fourment J, Rodde N, Van Sluys MA, Vicentini R, Garcia AAF, Forni-Martins ER, Carneiro MS, Hoffmann HP, Pinto LR, Landell MGA, Vincentz M, Berges H, de Souza AP. Sforça DA, et al. Among authors: pinto lr. Front Plant Sci. 2019 May 7;10:553. doi: 10.3389/fpls.2019.00553. eCollection 2019. Front Plant Sci. 2019. PMID: 31134109 Free PMC article.
70 results