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Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools.
Pineda-Peña AC, Faria NR, Imbrechts S, Libin P, Abecasis AB, Deforche K, Gómez-López A, Camacho RJ, de Oliveira T, Vandamme AM. Pineda-Peña AC, et al. Infect Genet Evol. 2013 Oct;19:337-48. doi: 10.1016/j.meegid.2013.04.032. Epub 2013 May 7. Infect Genet Evol. 2013. PMID: 23660484 Free article.
On the contribution of Angola to the initial spread of HIV-1.
Pineda-Peña AC, Varanda J, Sousa JD, Theys K, Bártolo I, Leitner T, Taveira N, Vandamme AM, Abecasis AB. Pineda-Peña AC, et al. Infect Genet Evol. 2016 Dec;46:219-222. doi: 10.1016/j.meegid.2016.08.009. Epub 2016 Aug 10. Infect Genet Evol. 2016. PMID: 27521160 Free PMC article.
Trends and predictors of transmitted drug resistance (TDR) and clusters with TDR in a local Belgian HIV-1 epidemic.
Pineda-Peña AC, Schrooten Y, Vinken L, Ferreira F, Li G, Trovão NS, Khouri R, Derdelinckx I, De Munter P, Kücherer C, Kostrikis LG, Nielsen C, Littsola K, Wensing A, Stanojevic M, Paredes R, Balotta C, Albert J, Boucher C, Gomez-Lopez A, Van Wijngaerden E, Van Ranst M, Vercauteren J, Vandamme AM, Van Laethem K. Pineda-Peña AC, et al. PLoS One. 2014 Jul 8;9(7):e101738. doi: 10.1371/journal.pone.0101738. eCollection 2014. PLoS One. 2014. PMID: 25003369 Free PMC article.
Sub-Epidemics Explain Localized High Prevalence of Reduced Susceptibility to Rilpivirine in Treatment-Naive HIV-1-Infected Patients: Subtype and Geographic Compartmentalization of Baseline Resistance Mutations.
Theys K, Van Laethem K, Gomes P, Baele G, Pineda-Peña AC, Vandamme AM, Camacho RJ, Abecasis AB. Theys K, et al. AIDS Res Hum Retroviruses. 2016 May;32(5):427-33. doi: 10.1089/AID.2015.0095. Epub 2016 Jan 29. AIDS Res Hum Retroviruses. 2016. PMID: 26651266 Free PMC article.
The impact of HIV-1 within-host evolution on transmission dynamics.
Theys K, Libin P, Pineda-Peña AC, Nowé A, Vandamme AM, Abecasis AB. Theys K, et al. Curr Opin Virol. 2018 Feb;28:92-101. doi: 10.1016/j.coviro.2017.12.001. Epub 2017 Dec 21. Curr Opin Virol. 2018. PMID: 29275182 Free article. Review.
29 results