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Whole community shotgun metagenomes of two biological soil crust types from the Mojave Desert.
Nguyen TM, Pombubpa N, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen I-MA, Ivanova NN, Kyrpides NC, Harmon-Smith M, Eloe-Fadrosh EA, Pietrasiak N, Stajich JE, Hom EFY. Nguyen TM, et al. Among authors: pietrasiak n. Microbiol Resour Announc. 2024 Mar 12;13(3):e0098023. doi: 10.1128/mra.00980-23. Epub 2024 Feb 8. Microbiol Resour Announc. 2024. PMID: 38329355 Free PMC article.
Metatranscriptomes of two biological soil crust types from the Mojave desert in response to wetting.
Nguyen TM, Pombubpa N, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Varghese N, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen I-MA, Ivanova NN, Kyrpides NC, Harmon-Smith M, Eloe-Fadrosh EA, Pietrasiak N, Stajich JE, Hom EFY. Nguyen TM, et al. Among authors: pietrasiak n. Microbiol Resour Announc. 2024 Feb 15;13(2):e0108023. doi: 10.1128/mra.01080-23. Epub 2024 Jan 8. Microbiol Resour Announc. 2024. PMID: 38189307 Free PMC article.
Unraveling the functional dark matter through global metagenomics.
Pavlopoulos GA, Baltoumas FA, Liu S, Selvitopi O, Camargo AP, Nayfach S, Azad A, Roux S, Call L, Ivanova NN, Chen IM, Paez-Espino D, Karatzas E; Novel Metagenome Protein Families Consortium; Iliopoulos I, Konstantinidis K, Tiedje JM, Pett-Ridge J, Baker D, Visel A, Ouzounis CA, Ovchinnikov S, Buluç A, Kyrpides NC. Pavlopoulos GA, et al. Nature. 2023 Oct;622(7983):594-602. doi: 10.1038/s41586-023-06583-7. Epub 2023 Oct 11. Nature. 2023. PMID: 37821698 Free PMC article.
Landscape characteristics shape surface soil microbiomes in the Chihuahuan Desert.
Hansen FA, James DK, Anderson JP, Meredith CS, Dominguez AJ, Pombubpa N, Stajich JE, Romero-Olivares AL, Salley SW, Pietrasiak N. Hansen FA, et al. Among authors: pietrasiak n. Front Microbiol. 2023 Jun 7;14:1135800. doi: 10.3389/fmicb.2023.1135800. eCollection 2023. Front Microbiol. 2023. PMID: 37350785 Free PMC article.
Thousands of small, novel genes predicted in global phage genomes.
Fremin BJ, Bhatt AS, Kyrpides NC; Global Phage Small Open Reading Frame (GP-SmORF) Consortium. Fremin BJ, et al. Cell Rep. 2022 Jun 21;39(12):110984. doi: 10.1016/j.celrep.2022.110984. Cell Rep. 2022. PMID: 35732113 Free PMC article.
18 results