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The Sphagnome Project: enabling ecological and evolutionary insights through a genus-level sequencing project.
Weston DJ, Turetsky MR, Johnson MG, Granath G, Lindo Z, Belyea LR, Rice SK, Hanson DT, Engelhardt KAM, Schmutz J, Dorrepaal E, Euskirchen ES, Stenøien HK, Szövényi P, Jackson M, Piatkowski BT, Muchero W, Norby RJ, Kostka JE, Glass JB, Rydin H, Limpens J, Tuittila ES, Ullrich KK, Carrell A, Benscoter BW, Chen JG, Oke TA, Nilsson MB, Ranjan P, Jacobson D, Lilleskov EA, Clymo RS, Shaw AJ. Weston DJ, et al. Among authors: piatkowski bt. New Phytol. 2018 Jan;217(1):16-25. doi: 10.1111/nph.14860. Epub 2017 Oct 27. New Phytol. 2018. PMID: 29076547 Free article.
Extensive Genome-Wide Phylogenetic Discordance Is Due to Incomplete Lineage Sorting and Not Ongoing Introgression in a Rapidly Radiated Bryophyte Genus.
Meleshko O, Martin MD, Korneliussen TS, Schröck C, Lamkowski P, Schmutz J, Healey A, Piatkowski BT, Shaw AJ, Weston DJ, Flatberg KI, Szövényi P, Hassel K, Stenøien HK. Meleshko O, et al. Mol Biol Evol. 2021 Jun 25;38(7):2750-2766. doi: 10.1093/molbev/msab063. Mol Biol Evol. 2021. PMID: 33681996 Free PMC article.
Phylogenomic structure and speciation in an emerging model: the Sphagnum magellanicum complex (Bryophyta).
Shaw AJ, Piatkowski B, Duffy AM, Aguero B, Imwattana K, Nieto-Lugilde M, Healey A, Weston DJ, Patel MN, Schmutz J, Grimwood J, Yavitt JB, Hassel K, Stenøien HK, Flatberg KI, Bickford CP, Hicks KA. Shaw AJ, et al. Among authors: piatkowski b. New Phytol. 2022 Nov;236(4):1497-1511. doi: 10.1111/nph.18429. Epub 2022 Aug 30. New Phytol. 2022. PMID: 35971292 Free article.
Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe.
Piatkowski BT, Carper DL, Carrell AA, Chen IA, Clum A, Daum C, Eloe-Fadrosh EA, Gilbert D, Granath G, Huntemann M, Jawdy SS, Klarenberg IJ, Kostka JE, Kyrpides NC, Lawrence TJ, Mukherjee S, Nilsson MB, Palaniappan K, Pelletier DA, Pennacchio C, Reddy TBK, Roux S, Shaw AJ, Warshan D, Živković T, Weston DJ. Piatkowski BT, et al. Microbiol Resour Announc. 2022 Oct 20;11(10):e0040022. doi: 10.1128/mra.00400-22. Epub 2022 Sep 7. Microbiol Resour Announc. 2022. PMID: 36069554 Free PMC article.
Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics.
Healey AL, Piatkowski B, Lovell JT, Sreedasyam A, Carey SB, Mamidi S, Shu S, Plott C, Jenkins J, Lawrence T, Aguero B, Carrell AA, Nieto-Lugilde M, Talag J, Duffy A, Jawdy S, Carter KR, Boston LB, Jones T, Jaramillo-Chico J, Harkess A, Barry K, Keymanesh K, Bauer D, Grimwood J, Gunter L, Schmutz J, Weston DJ, Shaw AJ. Healey AL, et al. Among authors: piatkowski b. Nat Plants. 2023 Feb;9(2):238-254. doi: 10.1038/s41477-022-01333-5. Epub 2023 Feb 6. Nat Plants. 2023. PMID: 36747050 Free PMC article.
Predicted structural proteome of Sphagnum divinum and proteome-scale annotation.
Davidson RB, Coletti M, Gao M, Piatkowski B, Sreedasyam A, Quadir F, Weston DJ, Schmutz J, Cheng J, Skolnick J, Parks JM, Sedova A. Davidson RB, et al. Among authors: piatkowski b. Bioinformatics. 2023 Aug 1;39(8):btad511. doi: 10.1093/bioinformatics/btad511. Bioinformatics. 2023. PMID: 37589594 Free PMC article.
67 results