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Feasibility of Inferring Spatial Transcriptomics from Single-Cell Histological Patterns for Studying Colon Cancer Tumor Heterogeneity.
Fatemi MY, Lu Y, Sharma C, Feng E, Azher ZL, Diallo AB, Srinivasan G, Rosner GM, Pointer KB, Christensen BC, Salas LA, Tsongalis GJ, Palisoul SM, Perreard L, Kolling FW, Vaickus LJ, Levy JJ. Fatemi MY, et al. Among authors: perreard l. medRxiv [Preprint]. 2023 Oct 9:2023.10.09.23296701. doi: 10.1101/2023.10.09.23296701. medRxiv. 2023. PMID: 37873186 Free PMC article. Preprint.
Inferring spatial transcriptomics markers from whole slide images to characterize metastasis-related spatial heterogeneity of colorectal tumors: A pilot study.
Fatemi M, Feng E, Sharma C, Azher Z, Goel T, Ramwala O, Palisoul SM, Barney RE, Perreard L, Kolling FW, Salas LA, Christensen BC, Tsongalis GJ, Vaickus LJ, Levy JJ. Fatemi M, et al. Among authors: perreard l. J Pathol Inform. 2023 Mar 29;14:100308. doi: 10.1016/j.jpi.2023.100308. eCollection 2023. J Pathol Inform. 2023. PMID: 37114077 Free PMC article.
Hydroxymethylation alterations in progenitor-like cell types of pediatric central nervous system tumors are associated with cell type-specific transcriptional changes.
Lee MK, Azizgolshani N, Zhang Z, Perreard L, Kolling FW, Nguyen LN, Zanazzi GJ, Salas LA, Christensen BC. Lee MK, et al. Among authors: perreard l. Res Sq [Preprint]. 2023 Feb 28:rs.3.rs-2517758. doi: 10.21203/rs.3.rs-2517758/v1. Res Sq. 2023. PMID: 36909536 Free PMC article. Updated. Preprint.
16 results