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Gene Ontology annotation highlights shared and divergent pathogenic strategies of type III effector proteins deployed by the plant pathogen Pseudomonas syringae pv tomato DC3000 and animal pathogenic Escherichia coli strains.
Lindeberg M, Biehl BS, Glasner JD, Perna NT, Collmer A, Collmer CW. Lindeberg M, et al. Among authors: perna nt. BMC Microbiol. 2009 Feb 19;9 Suppl 1(Suppl 1):S4. doi: 10.1186/1471-2180-9-S1-S4. BMC Microbiol. 2009. PMID: 19278552 Free PMC article. Review.
Unifying themes in microbial associations with animal and plant hosts described using the gene ontology.
Torto-Alalibo T, Collmer CW, Gwinn-Giglio M, Lindeberg M, Meng S, Chibucos MC, Tseng TT, Lomax J, Biehl B, Ireland A, Bird D, Dean RA, Glasner JD, Perna N, Setubal JC, Collmer A, Tyler BM. Torto-Alalibo T, et al. Microbiol Mol Biol Rev. 2010 Dec;74(4):479-503. doi: 10.1128/MMBR.00017-10. Microbiol Mol Biol Rev. 2010. PMID: 21119014 Free PMC article. Review.
Annotation and overview of the Pseudomonas savastanoi pv. savastanoi NCPPB 3335 draft genome reveals the virulence gene complement of a tumour-inducing pathogen of woody hosts.
Rodríguez-Palenzuela P, Matas IM, Murillo J, López-Solanilla E, Bardaji L, Pérez-Martínez I, Rodríguez-Moskera ME, Penyalver R, López MM, Quesada JM, Biehl BS, Perna NT, Glasner JD, Cabot EL, Neeno-Eckwall E, Ramos C. Rodríguez-Palenzuela P, et al. Among authors: perna nt. Environ Microbiol. 2010 Jun;12(6):1604-20. doi: 10.1111/j.1462-2920.2010.02207.x. Epub 2010 Apr 1. Environ Microbiol. 2010. PMID: 20370821
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005.
Riley M, Abe T, Arnaud MB, Berlyn MK, Blattner FR, Chaudhuri RR, Glasner JD, Horiuchi T, Keseler IM, Kosuge T, Mori H, Perna NT, Plunkett G 3rd, Rudd KE, Serres MH, Thomas GH, Thomson NR, Wishart D, Wanner BL. Riley M, et al. Among authors: perna nt. Nucleic Acids Res. 2006 Jan 5;34(1):1-9. doi: 10.1093/nar/gkj405. Print 2006. Nucleic Acids Res. 2006. PMID: 16397293 Free PMC article.
The evolution of metabolic networks of E. coli.
Baumler DJ, Peplinski RG, Reed JL, Glasner JD, Perna NT. Baumler DJ, et al. Among authors: perna nt. BMC Syst Biol. 2011 Nov 1;5:182. doi: 10.1186/1752-0509-5-182. BMC Syst Biol. 2011. PMID: 22044664 Free PMC article.
Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937.
Glasner JD, Yang CH, Reverchon S, Hugouvieux-Cotte-Pattat N, Condemine G, Bohin JP, Van Gijsegem F, Yang S, Franza T, Expert D, Plunkett G 3rd, San Francisco MJ, Charkowski AO, Py B, Bell K, Rauscher L, Rodriguez-Palenzuela P, Toussaint A, Holeva MC, He SY, Douet V, Boccara M, Blanco C, Toth I, Anderson BD, Biehl BS, Mau B, Flynn SM, Barras F, Lindeberg M, Birch PR, Tsuyumu S, Shi X, Hibbing M, Yap MN, Carpentier M, Dassa E, Umehara M, Kim JF, Rusch M, Soni P, Mayhew GF, Fouts DE, Gill SR, Blattner FR, Keen NT, Perna NT. Glasner JD, et al. Among authors: perna nt. J Bacteriol. 2011 Apr;193(8):2076-7. doi: 10.1128/JB.01513-10. Epub 2011 Jan 7. J Bacteriol. 2011. PMID: 21217001 Free PMC article.
65 results