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Page 1
Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage.
Hendriksen RS, Munk P, Njage P, van Bunnik B, McNally L, Lukjancenko O, Röder T, Nieuwenhuijse D, Pedersen SK, Kjeldgaard J, Kaas RS, Clausen PTLC, Vogt JK, Leekitcharoenphon P, van de Schans MGM, Zuidema T, de Roda Husman AM, Rasmussen S, Petersen B; Global Sewage Surveillance project consortium; Amid C, Cochrane G, Sicheritz-Ponten T, Schmitt H, Alvarez JRM, Aidara-Kane A, Pamp SJ, Lund O, Hald T, Woolhouse M, Koopmans MP, Vigre H, Petersen TN, Aarestrup FM. Hendriksen RS, et al. Among authors: pedersen sk. Nat Commun. 2019 Mar 8;10(1):1124. doi: 10.1038/s41467-019-08853-3. Nat Commun. 2019. PMID: 30850636 Free PMC article.
Proficiency testing for bacterial whole genome sequencing: an end-user survey of current capabilities, requirements and priorities.
Moran-Gilad J, Sintchenko V, Pedersen SK, Wolfgang WJ, Pettengill J, Strain E, Hendriksen RS; Global Microbial Identifier initiative’s Working Group 4 (GMI-WG4). Moran-Gilad J, et al. Among authors: pedersen sk. BMC Infect Dis. 2015 Apr 3;15:174. doi: 10.1186/s12879-015-0902-3. BMC Infect Dis. 2015. PMID: 25887164 Free PMC article.
Multiplex PCR for detection of plasmid-mediated colistin resistance determinants, mcr-1, mcr-2, mcr-3, mcr-4 and mcr-5 for surveillance purposes.
Rebelo AR, Bortolaia V, Kjeldgaard JS, Pedersen SK, Leekitcharoenphon P, Hansen IM, Guerra B, Malorny B, Borowiak M, Hammerl JA, Battisti A, Franco A, Alba P, Perrin-Guyomard A, Granier SA, De Frutos Escobar C, Malhotra-Kumar S, Villa L, Carattoli A, Hendriksen RS. Rebelo AR, et al. Among authors: pedersen sk. Euro Surveill. 2018 Feb;23(6):17-00672. doi: 10.2807/1560-7917.ES.2018.23.6.17-00672. Euro Surveill. 2018. PMID: 29439754 Free PMC article.
Proficiency of WHO Global Foodborne Infections Network External Quality Assurance System Participants in Identification and Susceptibility Testing of Thermotolerant Campylobacter spp. from 2003 to 2012.
Pedersen SK, Wagenaar JA, Vigre H, Roer L, Mikoleit M, Aidara-Kane A, Cawthorne AL, Aarestrup FM, Hendriksen RS. Pedersen SK, et al. J Clin Microbiol. 2018 Oct 25;56(11):e01066-18. doi: 10.1128/JCM.01066-18. Print 2018 Nov. J Clin Microbiol. 2018. PMID: 30209182 Free PMC article.
Molecular epidemiology of Salmonella Infantis in Europe: insights into the success of the bacterial host and its parasitic pESI-like megaplasmid.
Alba P, Leekitcharoenphon P, Carfora V, Amoruso R, Cordaro G, Di Matteo P, Ianzano A, Iurescia M, Diaconu EL, Study Group EN, Pedersen SK, Guerra B, Hendriksen RS, Franco A, Battisti A. Alba P, et al. Among authors: pedersen sk. Microb Genom. 2020 May;6(5):e000365. doi: 10.1099/mgen.0.000365. Epub 2020 Apr 9. Microb Genom. 2020. PMID: 32271142 Free PMC article.
Results of the 2020 Genomic Proficiency Test for the network of European Union Reference Laboratory for Antimicrobial Resistance assessing whole-genome-sequencing capacities.
Kristensen T, Sørensen LH, Pedersen SK, Jensen JD, Mordhorst H, Lacy-Roberts N, Lukjancenko O, Luo Y, Hoffmann M, Hendriksen RS. Kristensen T, et al. Among authors: pedersen sk. Microb Genom. 2023 Aug;9(8):mgen001076. doi: 10.1099/mgen.0.001076. Microb Genom. 2023. PMID: 37526643 Free PMC article.
Evaluation and validation of laboratory procedures for the surveillance of ESBL-, AmpC-, and carbapenemase-producing Escherichia coli from fresh meat and caecal samples.
Hendriksen RS, Cavaco LM, Guerra B, Bortolaia V, Agersø Y, Svendsen CA, Nielsen HN, Kjeldgaard JS, Pedersen SK, Fertner M, Hasman H. Hendriksen RS, et al. Among authors: pedersen sk. Front Microbiol. 2023 Aug 9;14:1229542. doi: 10.3389/fmicb.2023.1229542. eCollection 2023. Front Microbiol. 2023. PMID: 37621395 Free PMC article.
European Union Reference Laboratories support the National food, feed and veterinary Reference Laboratories with rolling out whole genome sequencing in Europe.
Michelacci V, Asséré A, Cacciò S, Cavaiuolo M, Mooijman K, Morabito S, Pedersen SK, Sayeb M, Segerman B, Simonsson M, Skarin H, Tozzoli R, van Hoek A, Hendriksen RS. Michelacci V, et al. Among authors: pedersen sk. Microb Genom. 2023 Jul;9(7):mgen001074. doi: 10.1099/mgen.0.001074. Microb Genom. 2023. PMID: 37489877 Free PMC article.
72 results