Peddu V - Search Results

1

NCBI's Virus Discovery Hackathon: Engaging Research Communities to Identify Cloud Infrastructure Requirements.

Connor R, Brister R, Buchmann JP, Deboutte W, Edwards R, Martí-Carreras J, Tisza M, Zalunin V, Andrade-Martínez J, Cantu A, D'Amour M, Efremov A, Fleischmann L, Forero-Junco L, Garmaeva S, Giluso M, Glickman C, Henderson M, Kellman B, Kristensen D, Leubsdorf C, Levi K, Levi S, Pakala S, Peddu V, Ponsero A, Ribeiro E, Roy F, Rutter L, Saha S, Shakya M, Shean R, Miller M, Tully B, Turkington C, Youens-Clark K, Vanmechelen B, Busby B. Connor R, et al. Among authors: peddu v. Genes (Basel). 2019 Sep 16;10(9):714. doi: 10.3390/genes10090714. Genes (Basel). 2019. PMID: 31527408 Free PMC article.

2

Metagenomic Analysis Reveals Clinical SARS-CoV-2 Infection and Bacterial or Viral Superinfection and Colonization.

Peddu V, Shean RC, Xie H, Shrestha L, Perchetti GA, Minot SS, Roychoudhury P, Huang ML, Nalla A, Reddy SB, Phung Q, Reinhardt A, Jerome KR, Greninger AL. Peddu V, et al. Clin Chem. 2020 Jul 1;66(7):966-972. doi: 10.1093/clinchem/hvaa106. Clin Chem. 2020. PMID: 32379863 Free PMC article.

3

Cell free DNA from respiratory pathogens is detectable in the blood plasma of Cystic Fibrosis patients.

Barrett SLR, Holmes EA, Long DR, Shean RC, Bautista GE, Ravishankar S, Peddu V, Cookson BT, Singh PK, Greninger AL, Salipante SJ. Barrett SLR, et al. Among authors: peddu v. Sci Rep. 2020 Apr 23;10(1):6903. doi: 10.1038/s41598-020-63970-0. Sci Rep. 2020. PMID: 32327704 Free PMC article.

4

Host-pathogen dynamics in longitudinal clinical specimens from patients with COVID-19.

Lin MJ, Rachleff VM, Xie H, Shrestha L, Lieberman NAP, Peddu V, Addetia A, Casto AM, Breit N, Mathias PC, Huang ML, Jerome KR, Greninger AL, Roychoudhury P. Lin MJ, et al. Among authors: peddu v. Sci Rep. 2022 Apr 7;12(1):5856. doi: 10.1038/s41598-022-09752-2. Sci Rep. 2022. PMID: 35393464 Free PMC article.

5

Comparative genomic, transcriptomic, and proteomic reannotation of human herpesvirus 6.

Greninger AL, Knudsen GM, Roychoudhury P, Hanson DJ, Sedlak RH, Xie H, Guan J, Nguyen T, Peddu V, Boeckh M, Huang ML, Cook L, Depledge DP, Zerr DM, Koelle DM, Gantt S, Yoshikawa T, Caserta M, Hill JA, Jerome KR. Greninger AL, et al. Among authors: peddu v. BMC Genomics. 2018 Mar 20;19(1):204. doi: 10.1186/s12864-018-4604-2. BMC Genomics. 2018. PMID: 29554870 Free PMC article.

6

RNA Sequencing of the In Vivo Human Herpesvirus 6B Transcriptome To Identify Targets for Clinical Assays Distinguishing between Latent and Active Infections.

Hill JA, Ikoma M, Zerr DM, Basom RS, Peddu V, Huang ML, Hall Sedlak R, Jerome KR, Boeckh M, Barcy S. Hill JA, et al. Among authors: peddu v. J Virol. 2019 Jan 17;93(3):e01419-18. doi: 10.1128/JVI.01419-18. Print 2019 Feb 1. J Virol. 2019. PMID: 30429336 Free PMC article.

7

High-resolution profiling of human cytomegalovirus cell-free DNA in human plasma highlights its exceptionally fragmented nature.

Peddu V, Bradley BT, Casto AM, Shree R, Colbert BG, Xie H, Santo TK, Huang ML, Cheng EY, Konnick E, Salipante SJ, Jerome KR, Lockwood CM, Greninger AL. Peddu V, et al. Sci Rep. 2020 Feb 28;10(1):3734. doi: 10.1038/s41598-020-60655-6. Sci Rep. 2020. PMID: 32111931 Free PMC article.

8

Sensitive Identification of Bacterial DNA in Clinical Specimens by Broad-Range 16S rRNA Gene Enrichment.

Rassoulian Barrett S, Hoffman NG, Rosenthal C, Bryan A, Marshall DA, Lieberman J, Greninger AL, Peddu V, Cookson BT, Salipante SJ. Rassoulian Barrett S, et al. Among authors: peddu v. J Clin Microbiol. 2020 Nov 18;58(12):e01605-20. doi: 10.1128/JCM.01605-20. Print 2020 Nov 18. J Clin Microbiol. 2020. PMID: 33028602 Free PMC article.

9

Stability of SARS-CoV-2 in Phosphate-Buffered Saline for Molecular Detection.

Perchetti GA, Huang ML, Peddu V, Jerome KR, Greninger AL. Perchetti GA, et al. Among authors: peddu v. J Clin Microbiol. 2020 Jul 23;58(8):e01094-20. doi: 10.1128/JCM.01094-20. Print 2020 Jul 23. J Clin Microbiol. 2020. PMID: 32414839 Free PMC article. No abstract available.

10

Sensitive Recovery of Complete SARS-CoV-2 Genomes from Clinical Samples by Use of Swift Biosciences' SARS-CoV-2 Multiplex Amplicon Sequencing Panel.

Addetia A, Lin MJ, Peddu V, Roychoudhury P, Jerome KR, Greninger AL. Addetia A, et al. Among authors: peddu v. J Clin Microbiol. 2020 Dec 17;59(1):e02226-20. doi: 10.1128/JCM.02226-20. Print 2020 Dec 17. J Clin Microbiol. 2020. PMID: 33046529 Free PMC article. No abstract available.

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