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PeakForest: a multi-platform digital infrastructure for interoperable metabolite spectral data and metadata management.
Paulhe N, Canlet C, Damont A, Peyriga L, Durand S, Deborde C, Alves S, Bernillon S, Berton T, Bir R, Bouville A, Cahoreau E, Centeno D, Costantino R, Debrauwer L, Delabrière A, Duperier C, Emery S, Flandin A, Hohenester U, Jacob D, Joly C, Jousse C, Lagree M, Lamari N, Lefebvre M, Lopez-Piffet C, Lyan B, Maucourt M, Migne C, Olivier MF, Rathahao-Paris E, Petriacq P, Pinelli J, Roch L, Roger P, Roques S, Tabet JC, Tremblay-Franco M, Traïkia M, Warnet A, Zhendre V, Rolin D, Jourdan F, Thévenot E, Moing A, Jamin E, Fenaille F, Junot C, Pujos-Guillot E, Giacomoni F. Paulhe N, et al. Metabolomics. 2022 Jun 14;18(6):40. doi: 10.1007/s11306-022-01899-3. Metabolomics. 2022. PMID: 35699774 Free PMC article.
Metavir: a web server dedicated to virome analysis.
Roux S, Faubladier M, Mahul A, Paulhe N, Bernard A, Debroas D, Enault F. Roux S, et al. Among authors: paulhe n. Bioinformatics. 2011 Nov 1;27(21):3074-5. doi: 10.1093/bioinformatics/btr519. Epub 2011 Sep 11. Bioinformatics. 2011. PMID: 21911332
Challenges and perspectives for naming lipids in the context of lipidomics.
Witting M, Malik A, Leach A, Bridge A, Aimo L, Conroy MJ, O'Donnell VB, Hoffmann N, Kopczynski D, Giacomoni F, Paulhe N, Gassiot AC, Poupin N, Jourdan F, Bertrand-Michel J. Witting M, et al. Among authors: paulhe n. Metabolomics. 2024 Jan 24;20(1):15. doi: 10.1007/s11306-023-02075-x. Metabolomics. 2024. PMID: 38267595 Free PMC article. Review.