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Page 1
Cellular and Molecular Probing of Intact Human Organs.
Zhao S, Todorov MI, Cai R, -Maskari RA, Steinke H, Kemter E, Mai H, Rong Z, Warmer M, Stanic K, Schoppe O, Paetzold JC, Gesierich B, Wong MN, Huber TB, Duering M, Bruns OT, Menze B, Lipfert J, Puelles VG, Wolf E, Bechmann I, Ertürk A. Zhao S, et al. Among authors: paetzold jc. Cell. 2020 Feb 20;180(4):796-812.e19. doi: 10.1016/j.cell.2020.01.030. Epub 2020 Feb 13. Cell. 2020. PMID: 32059778 Free PMC article.
Machine learning analysis of whole mouse brain vasculature.
Todorov MI, Paetzold JC, Schoppe O, Tetteh G, Shit S, Efremov V, Todorov-Völgyi K, Düring M, Dichgans M, Piraud M, Menze B, Ertürk A. Todorov MI, et al. Among authors: paetzold jc. Nat Methods. 2020 Apr;17(4):442-449. doi: 10.1038/s41592-020-0792-1. Epub 2020 Mar 11. Nat Methods. 2020. PMID: 32161395 Free PMC article.
SRflow: Deep learning based super-resolution of 4D-flow MRI data.
Shit S, Zimmermann J, Ezhov I, Paetzold JC, Sanches AF, Pirkl C, Menze BH. Shit S, et al. Among authors: paetzold jc. Front Artif Intell. 2022 Aug 12;5:928181. doi: 10.3389/frai.2022.928181. eCollection 2022. Front Artif Intell. 2022. PMID: 36034591 Free PMC article.
Spatial proteomics in three-dimensional intact specimens.
Bhatia HS, Brunner AD, Öztürk F, Kapoor S, Rong Z, Mai H, Thielert M, Ali M, Al-Maskari R, Paetzold JC, Kofler F, Todorov MI, Molbay M, Kolabas ZI, Negwer M, Hoeher L, Steinke H, Dima A, Gupta B, Kaltenecker D, Caliskan ÖS, Brandt D, Krahmer N, Müller S, Lichtenthaler SF, Hellal F, Bechmann I, Menze B, Theis F, Mann M, Ertürk A. Bhatia HS, et al. Among authors: paetzold jc. Cell. 2022 Dec 22;185(26):5040-5058.e19. doi: 10.1016/j.cell.2022.11.021. Cell. 2022. PMID: 36563667 Free article.
Whole-body cellular mapping in mouse using standard IgG antibodies.
Mai H, Luo J, Hoeher L, Al-Maskari R, Horvath I, Chen Y, Kofler F, Piraud M, Paetzold JC, Modamio J, Todorov M, Elsner M, Hellal F, Ertürk A. Mai H, et al. Among authors: paetzold jc. Nat Biotechnol. 2024 Apr;42(4):617-627. doi: 10.1038/s41587-023-01846-0. Epub 2023 Jul 10. Nat Biotechnol. 2024. PMID: 37430076 Free PMC article.
Distinct molecular profiles of skull bone marrow in health and neurological disorders.
Kolabas ZI, Kuemmerle LB, Perneczky R, Förstera B, Ulukaya S, Ali M, Kapoor S, Bartos LM, Büttner M, Caliskan OS, Rong Z, Mai H, Höher L, Jeridi D, Molbay M, Khalin I, Deligiannis IK, Negwer M, Roberts K, Simats A, Carofiglio O, Todorov MI, Horvath I, Ozturk F, Hummel S, Biechele G, Zatcepin A, Unterrainer M, Gnörich J, Roodselaar J, Shrouder J, Khosravani P, Tast B, Richter L, Díaz-Marugán L, Kaltenecker D, Lux L, Chen Y, Zhao S, Rauchmann BS, Sterr M, Kunze I, Stanic K, Kan VWY, Besson-Girard S, Katzdobler S, Palleis C, Schädler J, Paetzold JC, Liebscher S, Hauser AE, Gokce O, Lickert H, Steinke H, Benakis C, Braun C, Martinez-Jimenez CP, Buerger K, Albert NL, Höglinger G, Levin J, Haass C, Kopczak A, Dichgans M, Havla J, Kümpfel T, Kerschensteiner M, Schifferer M, Simons M, Liesz A, Krahmer N, Bayraktar OA, Franzmeier N, Plesnila N, Erener S, Puelles VG, Delbridge C, Bhatia HS, Hellal F, Elsner M, Bechmann I, Ondruschka B, Brendel M, Theis FJ, Erturk A. Kolabas ZI, et al. Among authors: paetzold jc. Cell. 2023 Aug 17;186(17):3706-3725.e29. doi: 10.1016/j.cell.2023.07.009. Epub 2023 Aug 9. Cell. 2023. PMID: 37562402 Free PMC article.
Virtual reality-empowered deep-learning analysis of brain cells.
Kaltenecker D, Al-Maskari R, Negwer M, Hoeher L, Kofler F, Zhao S, Todorov M, Rong Z, Paetzold JC, Wiestler B, Piraud M, Rueckert D, Geppert J, Morigny P, Rohm M, Menze BH, Herzig S, Berriel Diaz M, Ertürk A. Kaltenecker D, et al. Among authors: paetzold jc. Nat Methods. 2024 Apr 22. doi: 10.1038/s41592-024-02245-2. Online ahead of print. Nat Methods. 2024. PMID: 38649742
An automatic multi-tissue human fetal brain segmentation benchmark using the Fetal Tissue Annotation Dataset.
Payette K, de Dumast P, Kebiri H, Ezhov I, Paetzold JC, Shit S, Iqbal A, Khan R, Kottke R, Grehten P, Ji H, Lanczi L, Nagy M, Beresova M, Nguyen TD, Natalucci G, Karayannis T, Menze B, Bach Cuadra M, Jakab A. Payette K, et al. Among authors: paetzold jc. Sci Data. 2021 Jul 6;8(1):167. doi: 10.1038/s41597-021-00946-3. Sci Data. 2021. PMID: 34230489 Free PMC article.
Robust, Primitive, and Unsupervised Quality Estimation for Segmentation Ensembles.
Kofler F, Ezhov I, Fidon L, Pirkl CM, Paetzold JC, Burian E, Pati S, El Husseini M, Navarro F, Shit S, Kirschke J, Bakas S, Zimmer C, Wiestler B, Menze BH. Kofler F, et al. Among authors: paetzold jc. Front Neurosci. 2021 Dec 30;15:752780. doi: 10.3389/fnins.2021.752780. eCollection 2021. Front Neurosci. 2021. PMID: 35035351 Free PMC article.
Learn-Morph-Infer: A new way of solving the inverse problem for brain tumor modeling.
Ezhov I, Scibilia K, Franitza K, Steinbauer F, Shit S, Zimmer L, Lipkova J, Kofler F, Paetzold JC, Canalini L, Waldmannstetter D, Menten MJ, Metz M, Wiestler B, Menze B. Ezhov I, et al. Among authors: paetzold jc. Med Image Anal. 2023 Jan;83:102672. doi: 10.1016/j.media.2022.102672. Epub 2022 Nov 5. Med Image Anal. 2023. PMID: 36395623
19 results