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Page 1
Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop.
Sali A, Berman HM, Schwede T, Trewhella J, Kleywegt G, Burley SK, Markley J, Nakamura H, Adams P, Bonvin AM, Chiu W, Peraro MD, Di Maio F, Ferrin TE, Grünewald K, Gutmanas A, Henderson R, Hummer G, Iwasaki K, Johnson G, Lawson CL, Meiler J, Marti-Renom MA, Montelione GT, Nilges M, Nussinov R, Patwardhan A, Rappsilber J, Read RJ, Saibil H, Schröder GF, Schwieters CD, Seidel CA, Svergun D, Topf M, Ulrich EL, Velankar S, Westbrook JD. Sali A, et al. Structure. 2015 Jul 7;23(7):1156-67. doi: 10.1016/j.str.2015.05.013. Epub 2015 Jun 18. Structure. 2015. PMID: 26095030 Free PMC article.
NMR Exchange Format: a unified and open standard for representation of NMR restraint data.
Gutmanas A, Adams PD, Bardiaux B, Berman HM, Case DA, Fogh RH, Güntert P, Hendrickx PM, Herrmann T, Kleywegt GJ, Kobayashi N, Lange OF, Markley JL, Montelione GT, Nilges M, Ragan TJ, Schwieters CD, Tejero R, Ulrich EL, Velankar S, Vranken WF, Wedell JR, Westbrook J, Wishart DS, Vuister GW. Gutmanas A, et al. Nat Struct Mol Biol. 2015 Jun;22(6):433-4. doi: 10.1038/nsmb.3041. Nat Struct Mol Biol. 2015. PMID: 26036565 Free PMC article. No abstract available.
The Protein Data Bank archive as an open data resource.
Berman HM, Kleywegt GJ, Nakamura H, Markley JL. Berman HM, et al. J Comput Aided Mol Des. 2014 Oct;28(10):1009-14. doi: 10.1007/s10822-014-9770-y. Epub 2014 Jul 26. J Comput Aided Mol Des. 2014. PMID: 25062767 Free PMC article.
Assignments of RNase A by ADAPT-NMR and enhancer.
Tonelli M, Eller CH, Singarapu KK, Lee W, Bahrami A, Westler WM, Raines RT, Markley JL. Tonelli M, et al. Biomol NMR Assign. 2015 Apr;9(1):81-8. doi: 10.1007/s12104-014-9549-z. Epub 2014 Mar 12. Biomol NMR Assign. 2015. PMID: 24619609 Free PMC article.
Comment on on the propagation of errors by Jaskolski (2013).
Berman H, Kleywegt GJ, Nakamura H, Markley JL. Berman H, et al. Acta Crystallogr D Biol Crystallogr. 2013 Dec;69(Pt 12):2297. doi: 10.1107/S090744491302917X. Epub 2013 Nov 19. Acta Crystallogr D Biol Crystallogr. 2013. PMID: 24311571 Free PMC article.
Databases and Software for NMR-Based Metabolomics.
Ellinger JJ, Chylla RA, Ulrich EL, Markley JL. Ellinger JJ, et al. Curr Metabolomics. 2013;1(1):10.2174/2213235X11301010028. doi: 10.2174/2213235X11301010028. Curr Metabolomics. 2013. PMID: 24260723 Free PMC article.
Recommendations of the wwPDB NMR Validation Task Force.
Montelione GT, Nilges M, Bax A, Güntert P, Herrmann T, Richardson JS, Schwieters CD, Vranken WF, Vuister GW, Wishart DS, Berman HM, Kleywegt GJ, Markley JL. Montelione GT, et al. Structure. 2013 Sep 3;21(9):1563-70. doi: 10.1016/j.str.2013.07.021. Structure. 2013. PMID: 24010715 Free PMC article.
How community has shaped the Protein Data Bank.
Berman HM, Kleywegt GJ, Nakamura H, Markley JL. Berman HM, et al. Structure. 2013 Sep 3;21(9):1485-91. doi: 10.1016/j.str.2013.07.010. Structure. 2013. PMID: 24010707 Free PMC article.
23 results