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Hypothesis-free phenotype prediction within a genetics-first framework.
Lu C, Zaucha J, Gam R, Fang H, Ben Smithers, Oates ME, Bernabe-Rubio M, Williams J, Zelenka N, Pandurangan AP, Tandon H, Shihab H, Kalaivani R, Sung M, Sardar AJ, Tzovoras BG, Danovi D, Gough J. Lu C, et al. Among authors: oates me. Nat Commun. 2023 Feb 17;14(1):919. doi: 10.1038/s41467-023-36634-6. Nat Commun. 2023. PMID: 36808136 Free PMC article.
'Why genes in pieces?'-revisited.
Smithers B, Oates M, Gough J. Smithers B, et al. Nucleic Acids Res. 2019 Jun 4;47(10):4970-4973. doi: 10.1093/nar/gkz284. Nucleic Acids Res. 2019. PMID: 30997511 Free PMC article.
A proteome quality index.
Zaucha J, Stahlhacke J, Oates ME, Thurlby N, Rackham OJ, Fang H, Smithers B, Gough J. Zaucha J, et al. Among authors: oates me. Environ Microbiol. 2015 Jan;17(1):4-9. doi: 10.1111/1462-2920.12622. Epub 2014 Oct 22. Environ Microbiol. 2015. PMID: 25339269 Free article.
The SUPERFAMILY 1.75 database in 2014: a doubling of data.
Oates ME, Stahlhacke J, Vavoulis DV, Smithers B, Rackham OJ, Sardar AJ, Zaucha J, Thurlby N, Fang H, Gough J. Oates ME, et al. Nucleic Acids Res. 2015 Jan;43(Database issue):D227-33. doi: 10.1093/nar/gku1041. Epub 2014 Nov 20. Nucleic Acids Res. 2015. PMID: 25414345 Free PMC article.
Splice junctions are constrained by protein disorder.
Smithers B, Oates ME, Gough J. Smithers B, et al. Among authors: oates me. Nucleic Acids Res. 2015 May 26;43(10):4814-22. doi: 10.1093/nar/gkv407. Epub 2015 Apr 30. Nucleic Acids Res. 2015. PMID: 25934802 Free PMC article.
A predictive computational framework for direct reprogramming between human cell types.
Rackham OJ, Firas J, Fang H, Oates ME, Holmes ML, Knaupp AS; FANTOM Consortium; Suzuki H, Nefzger CM, Daub CO, Shin JW, Petretto E, Forrest AR, Hayashizaki Y, Polo JM, Gough J. Rackham OJ, et al. Among authors: oates me. Nat Genet. 2016 Mar;48(3):331-5. doi: 10.1038/ng.3487. Epub 2016 Jan 18. Nat Genet. 2016. PMID: 26780608 Free article.
The evolution of human cells in terms of protein innovation.
Sardar AJ, Oates ME, Fang H, Forrest AR, Kawaji H; FANTOM Consortium; Gough J, Rackham OJ. Sardar AJ, et al. Among authors: oates me. Mol Biol Evol. 2014 Jun;31(6):1364-74. doi: 10.1093/molbev/mst139. Epub 2014 Apr 1. Mol Biol Evol. 2014. PMID: 24692656 Free PMC article.
78 results