O'Donoghue SI - Search Results

1

Visualization and Analysis of Epiproteome Dynamics.

Kaur S, Baldi B, Vuong J, O'Donoghue SI. Kaur S, et al. Among authors: o donoghue si. J Mol Biol. 2019 Apr 5;431(8):1519-1539. doi: 10.1016/j.jmb.2019.01.044. Epub 2019 Feb 13. J Mol Biol. 2019. PMID: 30769119 Review.

2

Visual analytics of signalling pathways using time profiles.

Ma DK, Stolte C, Kaur S, Bain M, O'Donoghue SI. Ma DK, et al. Adv Exp Med Biol. 2015;823:3-22. doi: 10.1007/978-3-319-10984-8_1. Adv Exp Med Biol. 2015. PMID: 25381099

3

A benchmark dataset for analyzing and visualizing the dynamic epiproteome.

Kaur S, Baldi B, Vuong J, O'Donoghue SI. Kaur S, et al. Among authors: o donoghue si. Data Brief. 2019 May 30;25:104000. doi: 10.1016/j.dib.2019.104000. eCollection 2019 Aug. Data Brief. 2019. PMID: 31297408 Free PMC article.

4

Temporal ordering of omics and multiomic events inferred from time-series data.

Kaur S, Peters TJ, Yang P, Luu LDW, Vuong J, Krycer JR, O'Donoghue SI. Kaur S, et al. Among authors: o donoghue si. NPJ Syst Biol Appl. 2020 Jul 16;6(1):22. doi: 10.1038/s41540-020-0141-0. NPJ Syst Biol Appl. 2020. PMID: 32678105 Free PMC article.

5

SARS-CoV-2 structural coverage map reveals viral protein assembly, mimicry, and hijacking mechanisms.

O'Donoghue SI, Schafferhans A, Sikta N, Stolte C, Kaur S, Ho BK, Anderson S, Procter JB, Dallago C, Bordin N, Adcock M, Rost B. O'Donoghue SI, et al. Mol Syst Biol. 2021 Sep;17(9):e10079. doi: 10.15252/msb.202010079. Mol Syst Biol. 2021. PMID: 34519429 Free PMC article.

6

SnapShot: Phosphoregulation of Mitosis.

Burgess A, Vuong J, Rogers S, Malumbres M, O'Donoghue SI. Burgess A, et al. Cell. 2017 Jun 15;169(7):1358-1358.e1. doi: 10.1016/j.cell.2017.06.003. Cell. 2017. PMID: 28622516 Free article.

7

SnapShot: S-Phase Entry and Exit.

Burgess A, Vuong J, Marzec KA, Nicolai de Lichtenberg U, O'Donoghue SI, Jensen LJ. Burgess A, et al. Among authors: o donoghue si. Cell. 2019 Oct 17;179(3):802-802.e1. doi: 10.1016/j.cell.2019.09.031. Cell. 2019. PMID: 31626778 Free article.

8

Increased core body temperature exacerbates defective protein prenylation in mouse models of mevalonate kinase deficiency.

Munoz MA, Skinner OP, Masle-Farquhar E, Jurczyluk J, Xiao Y, Fletcher EK, Kristianto E, Hodson MP, O'Donoghue SI, Kaur S, Brink R, Zahra DG, Deenick EK, Perry KA, Robertson AA, Mehr S, Hissaria P, Mulders-Manders CM, Simon A, Rogers MJ. Munoz MA, et al. Among authors: o donoghue si. J Clin Invest. 2022 Oct 3;132(19):e160929. doi: 10.1172/JCI160929. J Clin Invest. 2022. PMID: 36189795 Free PMC article.

9

Molecular Graphics: Bridging Structural Biologists and Computer Scientists.

Martinez X, Krone M, Alharbi N, Rose AS, Laramee RS, O'Donoghue S, Baaden M, Chavent M. Martinez X, et al. Structure. 2019 Nov 5;27(11):1617-1623. doi: 10.1016/j.str.2019.09.001. Epub 2019 Sep 26. Structure. 2019. PMID: 31564470 Free article. Review.

10

Dark Proteins Important for Cellular Function.

Schafferhans A, O'Donoghue SI, Heinzinger M, Rost B. Schafferhans A, et al. Among authors: o donoghue si. Proteomics. 2018 Nov;18(21-22):e1800227. doi: 10.1002/pmic.201800227. Proteomics. 2018. PMID: 30318701

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