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Single-cell ATAC and RNA sequencing reveal pre-existing and persistent cells associated with prostate cancer relapse.
Taavitsainen S, Engedal N, Cao S, Handle F, Erickson A, Prekovic S, Wetterskog D, Tolonen T, Vuorinen EM, Kiviaho A, Nätkin R, Häkkinen T, Devlies W, Henttinen S, Kaarijärvi R, Lahnalampi M, Kaljunen H, Nowakowska K, Syvälä H, Bläuer M, Cremaschi P, Claessens F, Visakorpi T, Tammela TLJ, Murtola T, Granberg KJ, Lamb AD, Ketola K, Mills IG, Attard G, Wang W, Nykter M, Urbanucci A. Taavitsainen S, et al. Among authors: nykter m. Nat Commun. 2021 Sep 6;12(1):5307. doi: 10.1038/s41467-021-25624-1. Nat Commun. 2021. PMID: 34489465 Free PMC article.
Distinct transcriptomic profiles in children prior to the appearance of type 1 diabetes-linked islet autoantibodies and following enterovirus infection.
Lin J, Moradi E, Salenius K, Lehtipuro S, Häkkinen T, Laiho JE, Oikarinen S, Randelin S, Parikh HM, Krischer JP, Toppari J, Lernmark Å, Petrosino JF, Ajami NJ, She JX, Hagopian WA, Rewers MJ, Lloyd RE, Rautajoki KJ, Hyöty H, Nykter M; TEDDY Study Group. Lin J, et al. Among authors: nykter m. Nat Commun. 2023 Nov 22;14(1):7630. doi: 10.1038/s41467-023-42763-9. Nat Commun. 2023. PMID: 37993433 Free PMC article.
Gene expression dynamics in the macrophage exhibit criticality.
Nykter M, Price ND, Aldana M, Ramsey SA, Kauffman SA, Hood LE, Yli-Harja O, Shmulevich I. Nykter M, et al. Proc Natl Acad Sci U S A. 2008 Feb 12;105(6):1897-900. doi: 10.1073/pnas.0711525105. Epub 2008 Feb 4. Proc Natl Acad Sci U S A. 2008. PMID: 18250330 Free PMC article.
Fusion genes and their discovery using high throughput sequencing.
Annala MJ, Parker BC, Zhang W, Nykter M. Annala MJ, et al. Among authors: nykter m. Cancer Lett. 2013 Nov 1;340(2):192-200. doi: 10.1016/j.canlet.2013.01.011. Epub 2013 Jan 29. Cancer Lett. 2013. PMID: 23376639 Free PMC article. Review.
Next generation sequencing applications in cancer research.
Zhang W, Nykter M, Chen K. Zhang W, et al. Among authors: nykter m. Cancer Lett. 2013 Nov 1;340(2):149-50. doi: 10.1016/j.canlet.2013.05.026. Epub 2013 Jun 11. Cancer Lett. 2013. PMID: 23764479 No abstract available.
Overexpression of SNORD114-3 marks acute promyelocytic leukemia.
Liuksiala T, Teittinen KJ, Granberg K, Heinäniemi M, Annala M, Mäki M, Nykter M, Lohi O. Liuksiala T, et al. Among authors: nykter m. Leukemia. 2014 Jan;28(1):233-6. doi: 10.1038/leu.2013.250. Epub 2013 Aug 27. Leukemia. 2014. PMID: 23979522 No abstract available.
166 results