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Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage.
Hendriksen RS, Munk P, Njage P, van Bunnik B, McNally L, Lukjancenko O, Röder T, Nieuwenhuijse D, Pedersen SK, Kjeldgaard J, Kaas RS, Clausen PTLC, Vogt JK, Leekitcharoenphon P, van de Schans MGM, Zuidema T, de Roda Husman AM, Rasmussen S, Petersen B; Global Sewage Surveillance project consortium; Amid C, Cochrane G, Sicheritz-Ponten T, Schmitt H, Alvarez JRM, Aidara-Kane A, Pamp SJ, Lund O, Hald T, Woolhouse M, Koopmans MP, Vigre H, Petersen TN, Aarestrup FM. Hendriksen RS, et al. Among authors: nieuwenhuijse d. Nat Commun. 2019 Mar 8;10(1):1124. doi: 10.1038/s41467-019-08853-3. Nat Commun. 2019. PMID: 30850636 Free PMC article.
Population-based screening in a municipality after a primary school outbreak of the SARS-CoV-2 Alpha variant, the Netherlands, December 2020-February 2021.
van Beek J, Teesing G, Oude Munnink BB, Meima A, Vriend HJ, Elzakkers J, de Graaf M, Langeveld J, Medema GJ, Molenkamp R, Voeten H, Fanoy E, Koopmans M; Outbreak investigation and national genomic surveillance teams. van Beek J, et al. PLoS One. 2022 Oct 27;17(10):e0276696. doi: 10.1371/journal.pone.0276696. eCollection 2022. PLoS One. 2022. PMID: 36301829 Free PMC article.
Studies into the mechanism of measles-associated immune suppression during a measles outbreak in the Netherlands.
Laksono BM, de Vries RD, Verburgh RJ, Visser EG, de Jong A, Fraaij PLA, Ruijs WLM, Nieuwenhuijse DF, van den Ham HJ, Koopmans MPG, van Zelm MC, Osterhaus ADME, de Swart RL. Laksono BM, et al. Among authors: nieuwenhuijse df. Nat Commun. 2018 Nov 23;9(1):4944. doi: 10.1038/s41467-018-07515-0. Nat Commun. 2018. PMID: 30470742 Free PMC article.
The COMPARE Data Hubs.
Amid C, Pakseresht N, Silvester N, Jayathilaka S, Lund O, Dynovski LD, Pataki BÁ, Visontai D, Xavier BB, Alako BTF, Belka A, Cisneros JLB, Cotten M, Haringhuizen GB, Harrison PW, Höper D, Holt S, Hundahl C, Hussein A, Kaas RS, Liu X, Leinonen R, Malhotra-Kumar S, Nieuwenhuijse DF, Rahman N, Dos S Ribeiro C, Skiby JE, Schmitz D, Stéger J, Szalai-Gindl JM, Thomsen MCF, Cacciò SM, Csabai I, Kroneman A, Koopmans M, Aarestrup F, Cochrane G. Amid C, et al. Among authors: nieuwenhuijse df. Database (Oxford). 2019 Jan 1;2019:baz136. doi: 10.1093/database/baz136. Database (Oxford). 2019. PMID: 31868882 Free PMC article.
Setting a baseline for global urban virome surveillance in sewage.
Nieuwenhuijse DF, Oude Munnink BB, Phan MVT; Global Sewage Surveillance project consortium; Munk P, Venkatakrishnan S, Aarestrup FM, Cotten M, Koopmans MPG. Nieuwenhuijse DF, et al. Sci Rep. 2020 Aug 13;10(1):13748. doi: 10.1038/s41598-020-69869-0. Sci Rep. 2020. PMID: 32792677 Free PMC article.
Author Correction: Setting a baseline for global urban virome surveillance in sewage.
Nieuwenhuijse DF, Oude Munnink BB, Phan MVT; Global Sewage Surveillance project consortium; Munk P, Venkatakrishnan S, Aarestrup FM, Cotten M, Koopmans MPG. Nieuwenhuijse DF, et al. Sci Rep. 2021 Aug 25;11(1):17446. doi: 10.1038/s41598-021-95934-3. Sci Rep. 2021. PMID: 34433858 Free PMC article. No abstract available.
36 results